Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5990 ATGAAACGTATGAGAAATTCTCTCCAAACTCCAAAACAAATTGTTTCAACAGATTCATATTTAGATGATGATTGTTGGGAATATGTTTTCAAATTCATCTTCAATGACGACGATGACGATAACCGTTCCTATTTCAAATCACTTTCCTTAGTTAACAAGCAATTTCTCTCCATTACCAACCGTCTACGCCTCTCTCTCACCGTATGGAATCCAACCTGCCGTTTATTCTGTCGCCTTTTTTCAAGGTTCATCAATCTCATCTCCCTCGACCTCTCCTGTTACTATGGTCTCATCAACAATGTTCTCGTCCAAATCTCTCGTTTCCCATTGAAACTCACTTCGCTTAATCTCTCCAACCAACCCAAAATTCCGGCACACGGCTTGAGAGCTTTCTCGCGAAATATTACAACTCTAACCTCTCTCATTTGTTCCAATATTGCTTCTTTCTCTACTGCTGACTTGCTTCTTATCTCTCATTGCTTTCCTTCCCTCCAAGAACTTGACCTCAGTAACAGTATCAATGATTTTAAGCTAAATGCTGATATATCAATGGTGTTTCCTAAGCTGCGCAAAGTTAAAGTTAATTTATATGCTCGTAACCATACATTTACATACCCATGGCTTTTACAAGTATGTAAGAATTCTGAGTTTCTTGAAGATGTTGTGATGTCGAAGTGTACACAATTAACTCATCACGGCATTGCTTCTGCCATCCGTGAGAGACCAACTTTGAAGTCTCTATCAATTAGTTGGATGTCTAGCAAAGGCAACATTAGTTCACACTTTATTAACTCTCTAGTGAGTTTGAAGGACTTAGCTTGTCTTGATTTGTCATATTCGCTTATCTCCGATGATTTGCTTTCCTCTATTGCAACCGGAGGTCTTCCTTTGAAAAAGCTTGTCCTCCAATCCTGTCGAGGATATAGTTATGCTGGAATCTTTTGTTTGTTATCCAAGTGTCAATCTATACAACATTTGGATCTTCAAAATGCTTATTTTTTGAATGACCAACATGTTGTGGAGTTGTCTATGTTTTTGGGTGATTTAATGTCTATAAACCTTAGTCGATGTAACATGCTCACAGAGTTATCTTTGCTTTCACTTGTAAGTAATTGTCTTTCACTTAGTGAGATCAAAATGAATGACACAAGGATTGGGATTGGGAGAGAGGGTGTACTGAATTCTAATTCTTTCGAGGATTTCCTTGTAAGCCCTCAATTAAAGTCTCTCAGTTTGACCCATAGTTCCTGGCTAAGAGATGAAAGCATCAAAATGTTTGCTTCCATTTTCCCCAATTTGCAATTTCTTAATTTGAGTAATTGCACTAACATATCAGAAGAAGGTATTTTTCATGTTTTGAGGAGATGTTGTAAGATTAGACTTTTGAATTTAGCTAGCTGTTTACAAGTGAAGCTGCATGGAATGAACTTTGAAGTTCCTCAATTGAAGGTGTTGAACTTATCAAATACAAGTGTTGACGATGAAACACTTTGTGTGATCTCAAAGAATTGTTCTGGACTTTTGCAACTGATACTACAAAATTGTGATGATATTAGAAAGGAGGGAATCAAGCATGTGCTAAATAACTGCACGCAACTCAGAGAGATCAATTTGATGTATTGTTGTAAATTGGTTCTTAATATTGTTGACGAAATGATATTTTCAAGGCCATCATTGAGAAAGATAACCGTTTCATCTTGCAACATCTTCAATAACAAAAAGTTGGGTGACAAAAAGAGAAGATTCTTTTCGCGTCATGGATGTCTTTTGTTCTAG 1776 0.3688 MKRMRNSLQTPKQIVSTDSYLDDDCWEYVFKFIFNDDDDDNRSYFKSLSLVNKQFLSITNRLRLSLTVWNPTCRLFCRLFSRFINLISLDLSCYYGLINNVLVQISRFPLKLTSLNLSNQPKIPAHGLRAFSRNITTLTSLICSNIASFSTADLLLISHCFPSLQELDLSNSINDFKLNADISMVFPKLRKVKVNLYARNHTFTYPWLLQVCKNSEFLEDVVMSKCTQLTHHGIASAIRERPTLKSLSISWMSSKGNISSHFINSLVSLKDLACLDLSYSLISDDLLSSIATGGLPLKKLVLQSCRGYSYAGIFCLLSKCQSIQHLDLQNAYFLNDQHVVELSMFLGDLMSINLSRCNMLTELSLLSLVSNCLSLSEIKMNDTRIGIGREGVLNSNSFEDFLVSPQLKSLSLTHSSWLRDESIKMFASIFPNLQFLNLSNCTNISEEGIFHVLRRCCKIRLLNLASCLQVKLHGMNFEVPQLKVLNLSNTSVDDETLCVISKNCSGLLQLILQNCDDIRKEGIKHVLNNCTQLREINLMYCCKLVLNIVDEMIFSRPSLRKITVSSCNIFNNKKLGDKKRRFFSRHGCLLF* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5990 591 Gene3D Ribonuclease Inhibitor 476 587 IPR032675 -
Psa7g5990 591 Gene3D Ribonuclease Inhibitor 46 253 IPR032675 -
Psa7g5990 591 PANTHER UNCHARACTERIZED 16 251 - -
Psa7g5990 591 PANTHER UNCHARACTERIZED 405 556 - -
Psa7g5990 591 SMART LRR_CC_2 109 134 IPR006553 -
Psa7g5990 591 SMART LRR_CC_2 404 429 IPR006553 -
Psa7g5990 591 SMART LRR_CC_2 294 319 IPR006553 -
Psa7g5990 591 SMART LRR_CC_2 479 503 IPR006553 -
Psa7g5990 591 SMART LRR_CC_2 504 529 IPR006553 -
Psa7g5990 591 SMART LRR_CC_2 346 371 IPR006553 -
Psa7g5990 591 SMART LRR_CC_2 215 240 IPR006553 -
Psa7g5990 591 SMART LRR_CC_2 430 455 IPR006553 -
Psa7g5990 591 Gene3D Ribonuclease Inhibitor 254 386 IPR032675 -
Psa7g5990 591 SUPERFAMILY RNI-like 58 290 - -
Psa7g5990 591 Gene3D Ribonuclease Inhibitor 389 475 IPR032675 -
Psa7g5990 591 PANTHER NODULIN-LIKE PROTEIN 405 556 - -
Psa7g5990 591 PANTHER NODULIN-LIKE PROTEIN 16 251 - -
Psa7g5990 591 SUPERFAMILY RNI-like 317 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5990 Psa-Chr7 488983310 488985213 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5990 K10268 - gmx:100819538 461.84