Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5965 ATGGGTTCTAGAATCCCATCTCATCAGCTTAGTAATGGCCTATATGTATCGGGCCGGCCAGAGCAGCCGAAAGAAAGGGTTCCAACGATGTCCTCCGCAGCCATGCCATATACCGGCGGAGACATTAAAAAGTCGGGGGAATTAGGAAAAATGTTTGATATTCCTGTTGATGGCTCAAAGTCCAGAAAGTCTGGACCGTTAGCAGGTGCACCGTCACGAGCAACATCTTTCGGAGGAGCCGGTTCACATTCCGGACCAATTCATCCTAATGCTGCTGCTCGAGCTATCTATACTACTTCAGGTTCCATGTCTATTGGTGGCGCGGCTGGTTCAACTTCACAAAAGAAATCGAATTCCGGGCCGCTGAGTAAGCACGGGGAACCGGTTAAAAGGTCTTCCGGTCCTCAGTCTGGTGGAGTAACTCCAACTGGACGTCAAAATTCCGGACCTCTTGCCCCTGTTCTTCCGACAACAGGTCTCATTACATCGGGGCCTATATCGTCTGGCCCACTAAACTCTTCTGGTGCTCCTAGGAAAGTGTCCGGTCCTTTGGAAGCGACAGGTTCAATGAAGCTGCAAGGTTCTGCTGCTGCCGTTCACAATCAAGCTGTGACTGTTCTTAGTCAAGTTGCCGCGTCTTTCACTTGGAACACTTATTGGGGAAGAAGAGCTATAATGGGATTCGTTGCTAATTATCCGGACTCCGAGCTTAGAACTGCAAAGAATGGGCAATTTGTGAAGGTTTCCGGGGTTGTTACTTGCGGTAATGTACCTCTCGAGTCATCTTTCCAAAAAGTTCCCAGATGCGTATATACATCAACAAGTTTATACGAGTATCGAGGATGGGATTCAAAAGCTGCCAATCCTACACATCGACGATTTTCTTGGGGCCTTAGACTGCTCGAAAGGCGTGTGGTTGACTTTTACATCTCCGATTTCCAGTCTGGTTTAAGGGCATTAGTTAAGACTGGTCATGGTGCTAGAGTGACCCCATATGTAGATGACTCAAATCTCTTCAATGTAAATCCAACCAAAGAAGAGTTATCTCCAGAATTCCTCCGGTGGTTGGGAGAGAGAAATTTGTCAAGCGACGACCGCATCATGCGGCTAGAAGAAGGGCATATAAAAGAAGGAAGCACAGTGAGTGTAATGGGAGTTGTTCAGAGAAATGAGAATGTGCTTATGATAGTTCCACCACCAGAGCCAATAACAACAGGTTGCCATTGGTTGAAATGTATATTTCCTGCTAGCTTGGAAGGCATAGTGTTGAGATGTGAGGACATGTCAAAGACTGATGTGATACCAGTTTAA 1311 0.4683 MGSRIPSHQLSNGLYVSGRPEQPKERVPTMSSAAMPYTGGDIKKSGELGKMFDIPVDGSKSRKSGPLAGAPSRATSFGGAGSHSGPIHPNAAARAIYTTSGSMSIGGAAGSTSQKKSNSGPLSKHGEPVKRSSGPQSGGVTPTGRQNSGPLAPVLPTTGLITSGPISSGPLNSSGAPRKVSGPLEATGSMKLQGSAAAVHNQAVTVLSQVAASFTWNTYWGRRAIMGFVANYPDSELRTAKNGQFVKVSGVVTCGNVPLESSFQKVPRCVYTSTSLYEYRGWDSKAANPTHRRFSWGLRLLERRVVDFYISDFQSGLRALVKTGHGARVTPYVDDSNLFNVNPTKEELSPEFLRWLGERNLSSDDRIMRLEEGHIKEGSTVSVMGVVQRNENVLMIVPPPEPITTGCHWLKCIFPASLEGIVLRCEDMSKTDVIPV* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5965 436 MobiDBLite consensus disorder prediction 134 151 - -
Psa7g5965 436 MobiDBLite consensus disorder prediction 106 121 - -
Psa7g5965 436 MobiDBLite consensus disorder prediction 1 16 - -
Psa7g5965 436 MobiDBLite consensus disorder prediction 1 86 - -
Psa7g5965 436 PANTHER OSJNBA0035M09.9 PROTEIN 1 207 IPR040339 -
Psa7g5965 436 PANTHER OSJNBA0035M09.9 PROTEIN 204 436 IPR040339 -
Psa7g5965 436 MobiDBLite consensus disorder prediction 106 151 - -
Psa7g5965 436 PANTHER UBIQUITIN-SPECIFIC PROTEASE FAMILY C19-RELATED PROTEIN 204 436 - -
Psa7g5965 436 PANTHER UBIQUITIN-SPECIFIC PROTEASE FAMILY C19-RELATED PROTEIN 1 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5965 Psa-Chr7 488643727 488647648 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5965 - - pvu:PHAVU_008G253800g 803.897