Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5948 ATGGAGGTTCCTACTTCATGGGATTCCCTTCGCAAACAGGCAAGAAAACTTGAAGCTCAATTGGATGAGCAGATGAACGCTTATCGTAAATTGGTTTCTACCAATGTTTCGACAAAAGGTGATGCTGCAGAGAGTGATCTAGAGTCTTGGATTGAGCGGTTAATAAAACAACTCCAACAAGTAAACTCACATATGCAAGCGTGGGTGTCATCTGGTGGTTCAGATATGGTTTCTCATACTTTGACTAGACACCAAGAAATTCTTCAAGATCTCGCACAGGAATTTTATCGTCTCCGCTCAAGTCATCGAGCAAAGCAAGAACATGCTTCACTTTTAGACGATTTTAAAGAATTTGATAGATCAAGATTAGACTTGGAAGAGGGTGGTGAATCTGAACAGCATACACTTCTAAGAGAGCATGCAGCTATCAGTCGAAATACCGGACATATGGACGGTGTAATTTCACAAGCACAAGCAACACTAGGAGCACTTGTCTTCCAACGTTCAACGTTTGGTGGCATCAATTCAAAGCTCAGCAACGTCGGCAGTCGCCTCCCTACGGTAAATAACATACTGTCGGCAATAAAGCGAAAAAAGTCAATGGATACCCTTATACTTTCACTTGTGGCATCTGTATGCACATTTCTCATTTTGATCTACTGGATAACCAAATGA 675 0.4163 MEVPTSWDSLRKQARKLEAQLDEQMNAYRKLVSTNVSTKGDAAESDLESWIERLIKQLQQVNSHMQAWVSSGGSDMVSHTLTRHQEILQDLAQEFYRLRSSHRAKQEHASLLDDFKEFDRSRLDLEEGGESEQHTLLREHAAISRNTGHMDGVISQAQATLGALVFQRSTFGGINSKLSNVGSRLPTVNNILSAIKRKKSMDTLILSLVASVCTFLILIYWITK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5948 224 PANTHER GOS-28 SNARE- RELATED 1 224 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Psa7g5948 224 PANTHER GOLGI SNAP RECEPTOR COMPLEX MEMBER 1 1 224 - -
Psa7g5948 224 PIRSF Golgi_SNARE 1 223 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Psa7g5948 224 Coils Coil 7 34 - -
Psa7g5948 224 Pfam Snare region anchored in the vesicle membrane C-terminus 136 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5948 Psa-Chr7 488120709 488124093 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5948 K08495 - gmx:100797885 378.637