Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5944 ATGGACTACAGCTCTGAAGAAGAGTCAGATATCAGTGAATCTGAGATTGAAGAGTATTCTGAGAAACCTTACGAACAGTTAAAGGCTGGGAAATACAAAGTTCGGAATTTCAATGGCACTCTAAGGTGCCCATATTGTTCTGGAAAAAAGAAGCAGGAATTCAAATATAAAGACTTGTTGCAACACGCCTCTGGAGTAGGTAAAGGTTCTGCAAACAGAAGCACAATGCAAAAGGCAAACCACCTTGCTTTGGCAAAATATTTGCAGACCGACTTAGTTAATGAAGCAGAACAAGTACCTCCCCCAGCTGTGACCCAAACTGCCATTCAACCTGTCCAGCAAGTTGAAAATTATGTTTGGCCATGGACAGGCATAATTGTTAACATAAAGAGCGAATTGCATGATTCTGGATACTGGCTAAAGGAATTTGTCAAGTACAGACCATTGGATGTACATGTATTCATGATGGATGGTGCTGCTCAGGCTGTAATAGACTTCAACAATGACTGGAACGGTTTCATGAATGCATGTGAATTTGAAAAATCCTTGGAAACTAAACAGCATGGAAAAAGGGATTGGAATTCGATGGACTTGCAGGACAGTTCTGACATTTATGGATGGGTTGCTCGTGAAGATGATTTTTATGGTGGGGGGCCAATTGGGGAGTACCTTCGCAATAAAGGAAGGCTGAGAACAATTTCAGATATTGTACAAGAAGCATCTGAAAACAGAAACAGCATTGTGGAAAACCTGGCTAATGAAATTGATATTACAAATGAAAACCTCAACAAAATGCAGTATAAGTATAATGAGAAGACTATGTCCTTAAGTAGGATGCTGGAGGAGAAAGACAAGCTTCACAATGCTTTTGTTGAAGAGTCAAGGAGTATGCAGCGTAAAGCTCGTGAGGAGGTACGAAGGATCTTGGAAGAACAAGAAAAGTTGAGTAATGAATTGGATGAAAAAATGCGGAAGCTTGACTCCTGGAGCAGAGATCTGAATAAACGTGAGGTTCTAACTGATCAAGAGAGGCAGAAACTTGAAGAGGACAAGAAGAAGAAAGACATAAGGAATGAATCACTCTTGGCGGCTTCAAAGGAGCAGAAGATAGCTGATGAAAATGTTTTCAGGCTTGTTGAAGAGCAAAAGAGAGAAAAAGAAGAGGCCTTAAACAAGATCCTTCTATTGGAGAAGCAACTAGACGCCAAACAAAAGTTAGAAATGGAGATTGAGGAGTTAAAAGGGAAACTGCAAGTTATGAAACATCTTGGAGATCAAGATGATGCAGCTATCAAGAAAAAAATGGAAGAAATGAATGCTGAATTGGAAGACAAAATAGATAGTTTGGAAGATATGGAGGCCATGAATAACACCCTCGTGACCAAGGAGCGTCGAAGCAATGATGAACTTCAGGAAGCTCGGAAAGAATTAATAGAAGGGTTAAATGAAATGCTGACTGGTGCTAAAACTAATATTGGGACCAAGAGAATGGGAGACCTTGACCAGAAGGTTTTTCTGAATGCGTCAAAGAAAAGATATTCTGAGGAAGAAGCTGGGATCAAGGGTGTTGAGCTTTGCTCTATGTGGCAGGAGAATGTGAAGAATACAGCTTGGCACCCTTTTAAAGTGGTTAAAGTGAATGATGATCATGTGACAGTTATAGATGAGGAAGATGAGAAATTACGAAATCTCAAGCAGGAATGGGGAGATGAGGTATATTCAGCTGTTGAAACAGCCTTGAAAGAAATAAATGAATACAATGCAAGTGGTGGATATGCTGTTTGGGAGCTATGGAACTTCAAAGAAAAGAGAAAGGCAACATTGAAAGAAGTTATTACTTATATTGTGGATCATATGAAGAACCTTAAGCGCAAGAGAAAATAG 1884 0.397 MDYSSEEESDISESEIEEYSEKPYEQLKAGKYKVRNFNGTLRCPYCSGKKKQEFKYKDLLQHASGVGKGSANRSTMQKANHLALAKYLQTDLVNEAEQVPPPAVTQTAIQPVQQVENYVWPWTGIIVNIKSELHDSGYWLKEFVKYRPLDVHVFMMDGAAQAVIDFNNDWNGFMNACEFEKSLETKQHGKRDWNSMDLQDSSDIYGWVAREDDFYGGGPIGEYLRNKGRLRTISDIVQEASENRNSIVENLANEIDITNENLNKMQYKYNEKTMSLSRMLEEKDKLHNAFVEESRSMQRKAREEVRRILEEQEKLSNELDEKMRKLDSWSRDLNKREVLTDQERQKLEEDKKKKDIRNESLLAASKEQKIADENVFRLVEEQKREKEEALNKILLLEKQLDAKQKLEMEIEELKGKLQVMKHLGDQDDAAIKKKMEEMNAELEDKIDSLEDMEAMNNTLVTKERRSNDELQEARKELIEGLNEMLTGAKTNIGTKRMGDLDQKVFLNASKKRYSEEEAGIKGVELCSMWQENVKNTAWHPFKVVKVNDDHVTVIDEEDEKLRNLKQEWGDEVYSAVETALKEINEYNASGGYAVWELWNFKEKRKATLKEVITYIVDHMKNLKRKRK* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5944 627 Pfam XH domain 495 625 IPR005379 -
Psa7g5944 627 MobiDBLite consensus disorder prediction 1 15 - -
Psa7g5944 627 Coils Coil 339 364 - -
Psa7g5944 627 Pfam XS domain 116 214 IPR005380 GO:0031047
Psa7g5944 627 PANTHER FACTOR OF DNA METHYLATION 1-RELATED 4 626 - -
Psa7g5944 627 PANTHER RIBONUCLEASE P SUBUNIT P38 4 626 IPR045177 GO:0080188
Psa7g5944 627 Coils Coil 432 476 - -
Psa7g5944 627 Coils Coil 248 268 - -
Psa7g5944 627 Pfam XS zinc finger domain 43 85 IPR005381 GO:0031047
Psa7g5944 627 Coils Coil 291 332 - -
Psa7g5944 627 Coils Coil 379 423 - -
Psa7g5944 627 MobiDBLite consensus disorder prediction 1 22 - -
Psa7g5944 627 Coils Coil 547 567 - -
Psa7g5944 627 Gene3D XS domain 111 270 IPR038588 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5944 Psa-Chr7 487958379 487964618 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5944 - - mtr:MTR_4g131350 1068.53