Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5943 ATGCAGCTAGGTTTACCGCAAAGCGATTCGATTCAGATTCGCGAAGTGTGGAACGATAATCTTGAAGCAGAGTTCGCTTTAATTCGGGAAATCGTCGATGCTTATCCTTACATAGCCATGGACACGGAGTTCCCTGGAATTGTTCTTCGTCCTGTTGGTAGTTTCAAAAACAGTTACGATTTCCATTATCAAACCCTAAAAGACAACGTGGACATGCTCAAGCTCATTCAATTGGGTCTCACTTTCTCCGATGAGCATGGGAACCTTCCTACTTTCCGCGACGATGACGATGATAGGTTCTGTATCTGGCAATTCAATTTCAGAGAATTCAATGTGAATGAGGATATTTTTGCAAATGATTCCATAGAGCTTTTGAGACAGTGTGGGATTGATTTCGAGAAGAATAATGAGAACGGTATTGATGCTCGGAGATTCGGTGAGCTTTTGATGTCTTCTGGAATTGTTTTGAATGATAGTGTTCATTGGGTAACTTTTCACAGTGGGTATGATTTTGGTTATTTGTTGAAGTTATTGACTTGTCAGAATTTGCCTGATACACAAGTTGGGTTCTTTAATTTGATCAACATGTATTTCCCTACTGTGTATGATATCAAACATTTAATGAAGTTTTGCAATAGTCTTCATGGAGGGTTGAACAAGCTTGCGGAGTTGTTGGAGGTCGAGAGGGTTGGGATTTGTCATCAAGCAGGCTCCGACAGTTTGCTCACATCGTGTACATTCATGAAATTGAAAGAGAATTTCTTTAGTGGATCTTTGGAGAGATACGCAGGGGTCTTATATGGGTTAGGTCTTGAGAATGGACAGAGTACTCATTAA 837 0.4038 MQLGLPQSDSIQIREVWNDNLEAEFALIREIVDAYPYIAMDTEFPGIVLRPVGSFKNSYDFHYQTLKDNVDMLKLIQLGLTFSDEHGNLPTFRDDDDDRFCIWQFNFREFNVNEDIFANDSIELLRQCGIDFEKNNENGIDARRFGELLMSSGIVLNDSVHWVTFHSGYDFGYLLKLLTCQNLPDTQVGFFNLINMYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTSCTFMKLKENFFSGSLERYAGVLYGLGLENGQSTH* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5943 278 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 5 278 IPR039637 GO:0004535|GO:0030014
Psa7g5943 278 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 6-RELATED 5 278 - -
Psa7g5943 278 SUPERFAMILY Ribonuclease H-like 13 269 IPR012337 -
Psa7g5943 278 Pfam CAF1 family ribonuclease 16 140 IPR006941 -
Psa7g5943 278 Gene3D - 2 272 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5943 Psa-Chr7 487951602 487953940 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5943 K12581 - gmx:100789409 514.227