Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5939 ATGAAGACACTGATTTCCGATGAGCTTTTGAGACACAGAGACGAGGATGTTAAGATTTCGGTTACAGCTTGTCTCACTGAAATTGCAAGAATTACAGCACCAAATGCTCCTTATGATGATGAAAACATGAAGGAATTTTTGAAGCTTGCCGTGACAGCTTTTGAAAAATTGTCATATGTATCTGGCCGCAGATATGAAAAAGCAATTAGCATACTTGAAATTTTTTCAAAGATCAAGATGTTCTTGATCATGCTGGACCTTGAGTGTGATGACCTGGTTATGGAGATGTTTCGACATTTCTTGAGAATTATAAGGTCAAACCATCCGAGTAATGTAATTGAATCAATGGAGAATGTAATGACGGGGATACTTGACGAAAGCGAAGATATTTCCTTGGATCTTCTTAGGCCTTTGTTAGATAGTGTAAAAAAGGAGAACCAGACAATATCACCTATTTGTCGGACCTTGGGGGAGAAAGTAATTACAAATTGTGCTGTCAAACTTAAACCTTATCTGATGCAAGCAGTTGTATCTTCTGGAAGAACGCTTGATGAGTATCCGCAAATAGTAGTTTCTATTTGCCAGAATCATCCTGAATCACAAGAACACAATCAATCATTAGTTCAAGCAGTTGAGAACAATCTTGATGTACCTAAAGATGCTACTGAAGAGCCCTTTGACGTGACAAAAGGCCTTGAAACAGATACTAGTTGTGTGAGAGATTTCCAAATTGTAAATGACATGGAGACAAATATACAAAGTACTAGTGCTGCTACTATGAACGGAGAAGTTGTAGAATGTTTTGGTTCAAAAAGAAAATTGCATTTATGTACTAAAAACTCCGAAAAAACAAATCCAAAAACAAGTACAAGCAATTTAGAGTTAGTTCAGGAACTGAACTCTGAAATTCAACTGGATATTGTTCCAAAAAAGAGAGCTCGTAAGCCTAATTCTTTAATGAATCCAGAGGAAGGATACGATCACTCTTGGATTTCATCTCAATCCAAAAAGGCTCATGATAATGGCTATGCTCTTGCACGTTCTAAAAGCCCTACTTCCACAAAGGGTAAAACACTGTCAAATCCCAAAACTGTCGACCAAGCACACTTTTCGGAGGTTAAGAATGGAAAAGCATCTATAAAAACATCGGATATAGGAGGCAGTTTTCTATCTTGTGAAAATCCTGCTTCTATTGATGGAATTGTAGTGTCAAATCTTGAAGATGTGAGCAATGCTTGTGAATCTAAAAATGATTCTCTTACAAATCATAACATTCGTAATGGGAAGCGTTCCCTAAAAAAGGCCGGCCAACGGCAAAAGTCAATTCAGCCCATTAGGAAGTTAAAGGATGATCAGTTTTGGAGTCCTTCTTTGCCATTGAAGAAGGACTTCTCTCAAAAATGCCTTGGTTAA 1413 0.3744 MKTLISDELLRHRDEDVKISVTACLTEIARITAPNAPYDDENMKEFLKLAVTAFEKLSYVSGRRYEKAISILEIFSKIKMFLIMLDLECDDLVMEMFRHFLRIIRSNHPSNVIESMENVMTGILDESEDISLDLLRPLLDSVKKENQTISPICRTLGEKVITNCAVKLKPYLMQAVVSSGRTLDEYPQIVVSICQNHPESQEHNQSLVQAVENNLDVPKDATEEPFDVTKGLETDTSCVRDFQIVNDMETNIQSTSAATMNGEVVECFGSKRKLHLCTKNSEKTNPKTSTSNLELVQELNSEIQLDIVPKKRARKPNSLMNPEEGYDHSWISSQSKKAHDNGYALARSKSPTSTKGKTLSNPKTVDQAHFSEVKNGKASIKTSDIGGSFLSCENPASIDGIVVSNLEDVSNACESKNDSLTNHNIRNGKRSLKKAGQRQKSIQPIRKLKDDQFWSPSLPLKKDFSQKCLG* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5939 470 MobiDBLite consensus disorder prediction 337 370 - -
Psa7g5939 470 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 1 418 IPR039776 GO:0007064
Psa7g5939 470 SUPERFAMILY ARM repeat 8 215 IPR016024 -
Psa7g5939 470 PANTHER SISTER CHROMATID COHESION PDS5-LIKE PROTEIN 1 418 - -
Psa7g5939 470 Pfam Sister chromatid cohesion protein PDS5 protein 2 174 - -
Psa7g5939 470 MobiDBLite consensus disorder prediction 309 328 - -
Psa7g5939 470 MobiDBLite consensus disorder prediction 346 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5939 Psa-Chr7 487857366 487859879 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5939 - - mtr:MTR_4g006875 524.628