Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5920 ATGGCGCTCCTTCTCCGCCTCAAAACAACAAGACTCAAGACCCACACGCACACTAACTCTCCTTCACTCCACCACCTCTTCTCCACCTCCAATGCCGGCGGAGACGGCGGCGACGATGGCAACAAACCTCCTTCCGACTCCTTCGTCGACGCTTTAAGGGATCTCAGAAGCTCGCTCAAACGACAACCAACCTCGAACCCACCTTCCCGTCTCTTTTCCCCCAATTCGCAACAGAGTGAATACACCGGCGAAATCATGAGCAAAATCCAGAGTTTCCGCTCACCACTTCCCGAAGATCCATCTTCGTCTTCTCAGAAGAAGCAAATCTCGTTTCAGGATATTTACAGCAAAATAAGAAATCGTTCAGGTGATTCCGGAGAAAATGCTGGTTCGGAAACTTCAAAACCCGCCACCGGCGGAAGAGGCGGTGCTATGCCTATTGAAGTTATTCGCGGAAGCTTAATGCAGCTCAAAGGTACGAATCCAACACCGTCCTCGAGATGGAGGCCTTCTCCAAGCTCCCCGTTGTTCAGTGGGACTAGTACTAAGCCGGATTCGATTTTCGGAAAAGAGTTTAGGGAAAGATTAGCGAAGTCTAACGATCCTTCGGCGAGTTTGAAGAATTTGGGTTCTGTTGGGATATACTTGCATGATGAGTTGGGTGAGAAATTGAAGAAATTGAGACCTCCGGTGAAAGGAAAAGAATGGTTTTCAATTGCTGAATTGAATGAGAGGTTGACGAAAGTGAGGGAGATGGATGAAAGTGAAGCTAATTCCAGTTCCAGTGAAAAAGATGTGTATAACATTTTGAAAGAGTCTGTTAATCATATTAAAGCTAAAGAAGCTCAGAAGCCAAAGATAGCTTCACTGCAGAGAGTTGATTTTTTGTCCATGATGGGTGGGACTCCTTCCTACATGACAAAGCCTCCTAAAGAGCATCTTGTTGAAAAGTATTTTCATCCAGATAACATGTCCTCAGCCGAAAAGTTGAAAATTCAACTCACGAAGGTTAGAGATGAATTTAAGATGTCCGAGTCAGATTGTGGCTCTGCTCGTGTTCAAGTTGCCACACTCACAACCAAGATTAAGCATCTATCATCAGTTCTACATAAAAAGGATGTGCATTCTCGGAAAGGTCTGATAGCAATGGTTCAAAAGAGGAAAAAGTTGCTGAAATACCTCAGAAGAACCGACTGGGATTCCTATTGTTTTGTTATCTCTAAGCTAGGTCTACGTGATAATCCAGAACATACTTATAAAGCTCGGACTGGCAAATCCGGCGATGTAGCCAATTAA 1296 0.4475 MALLLRLKTTRLKTHTHTNSPSLHHLFSTSNAGGDGGDDGNKPPSDSFVDALRDLRSSLKRQPTSNPPSRLFSPNSQQSEYTGEIMSKIQSFRSPLPEDPSSSSQKKQISFQDIYSKIRNRSGDSGENAGSETSKPATGGRGGAMPIEVIRGSLMQLKGTNPTPSSRWRPSPSSPLFSGTSTKPDSIFGKEFRERLAKSNDPSASLKNLGSVGIYLHDELGEKLKKLRPPVKGKEWFSIAELNERLTKVREMDESEANSSSSEKDVYNILKESVNHIKAKEAQKPKIASLQRVDFLSMMGGTPSYMTKPPKEHLVEKYFHPDNMSSAEKLKIQLTKVRDEFKMSESDCGSARVQVATLTTKIKHLSSVLHKKDVHSRKGLIAMVQKRKKLLKYLRRTDWDSYCFVISKLGLRDNPEHTYKARTGKSGDVAN* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5920 431 Gene3D - 329 377 - -
Psa7g5920 431 Gene3D - 379 414 - -
Psa7g5920 431 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 429 - -
Psa7g5920 431 MobiDBLite consensus disorder prediction 92 111 - -
Psa7g5920 431 MobiDBLite consensus disorder prediction 58 81 - -
Psa7g5920 431 CDD Ribosomal_S15p_S13e 333 410 IPR000589 GO:0003735|GO:0005840|GO:0006412
Psa7g5920 431 Hamap 30S ribosomal protein S15 [rpsO]. 324 413 IPR005290 GO:0003735|GO:0005840|GO:0006412
Psa7g5920 431 MobiDBLite consensus disorder prediction 15 81 - -
Psa7g5920 431 TIGRFAM S15_bact: ribosomal protein uS15 334 412 IPR005290 GO:0003735|GO:0005840|GO:0006412
Psa7g5920 431 MobiDBLite consensus disorder prediction 120 135 - -
Psa7g5920 431 MobiDBLite consensus disorder prediction 15 29 - -
Psa7g5920 431 SUPERFAMILY S15/NS1 RNA-binding domain 333 413 IPR009068 -
Psa7g5920 431 SMART Ribosomal_S15_2 334 412 IPR000589 GO:0003735|GO:0005840|GO:0006412
Psa7g5920 431 MobiDBLite consensus disorder prediction 159 181 - -
Psa7g5920 431 Pfam Ribosomal protein S15 336 412 IPR000589 GO:0003735|GO:0005840|GO:0006412
Psa7g5920 431 MobiDBLite consensus disorder prediction 120 143 - -
Psa7g5920 431 PANTHER S15/NS1, RNA-BINDING PROTEIN 1 429 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5920 - - cam:101488736 526.554