Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5907 ATGTTGCACCTCAACCTAACCCGCCATCGGTTCCCAGCCAGAATATTAGCATATATTCCAACACACAACAACCTGGGCAAAATTCTGTTGGCAGCAAGTTGTTCCCCCACAGCAACAGCAACAACCACAGAATCAACAGATTCTTTACCAGCAGCAGCAACAAGTTATGAAGCATATGCTATCTCAGATGCAGCAACAACAACAGCAGAACCTTCTGCAACCAAACCAGTTGAATACCTCTCAACAATCAGTTATGCAAACGTCATCTGCTATGCAGCCTTCGACGATGCTCAACAGCAGAACCTTCTGCAACCAAACCAGTTGAATACCTCTCAACAATCAGTTATGCAAACGTCATCTGCTATGCAGCCTTCGACGATGCAATCGATTCTATCTAGCCTTCAACAAAATCAGCAGTCTAACAATGTTCAACAGTCAACACAGTCTAGGCTTCAGCAACATTCCCAAATTATTAGGCAGCAACATCAACAGAATTCTATTGCTCAACAGCAACAGCAACAACCACAGAATCAACAGATTCTTTACCAGCAGCAGCAACAGTTTATGAAGCATATGCTATCTCAGATGCAGCAACAACAACAGCAGAACCTTCTGCAACCAAATCAGTTGAATACCTCTCAACAATCAGTTATGCAAACGTCATCTGCTATGCAGCTTTCGACGATGCAATCGATTCTATCTAGCCTTCAACAAAATCAGCAGTCTAACAATGTTCAAAAGTCAACACAGTCTAGGCTTCAGCAACATTCCCAAATTATTAGGCAGCAACATCAACAGAATTCTATTGCTCAACAGCAACAAACACCAATGTTGCAACAACTGTTAATAAATCAGCAAAATAATCTAACAAATATACATCAACAACTTTCGGGAAATGATGTACCCGGGTTACAGCAACAGCAGTTTGGAACTGATTCTGGCAACCAAGGTATCCAAACAAGCCATCATTTTGCACAAGTGTTGCAACAACCAAAGTTTTCAATGCAGCCACAACTGCAACACAATGCATCAAAGTTGTTGCCATCTCAGTCGCAGCAGTCCCAGCCACAGGCTTCACCGCAGCAATTAATGTCGCAGATTCACAATCAGCTTGCACTGATGCAACAGCAGCCAAGTTCTTTGCAAAAATTGCAACGATATATGCAGCAAAATCTCCAAGCATCAGGGTCCTTACATCAACAGCAAAAACAATTATATCAATCCCAAAGAGCTCTTCCTGAAACATCCACATCTTCTGTAGATTCTACAGCACAGACTGAACAACTAAGTGGGGGTGATTGGCAAGAAGAATTATACCAAAGGGTGCAAACCATGAAAGAAGATTACTTGCCAGATCTGGATGAAATGTTCCAGGAAATTGCTATGAAACTTCAGCAGTATGACCCTACTCCTCAACAGCCAAAGTCAGATCAGATTGAAAAGTTGAGGGTATATAGACTGATATTGGAACGCATGATACTATTCCTACAGCTTCCTAAGAACAGCATTGGGCTTAGTTTGAAGGAAAAATTGGGAGCATATGAAAAGCAGATTGTACATCTCATAAGTTCATTTAAGCTCAGGAAAGCCATCTCGTCCTTGCAACCAGGACAGCTTCCCCCAACTCATATGTCTTCGACACCACAGTCACAATCTCAAGTTACTTCAGTACAGTCTCATGAAAATCAAATGATCTTTCAAATGCAGCCATCAAACTTACAAGGTTCTGCAGCAACTCTACAACAAAACAATGCTGCGAGCTTGCAGCACAATTCTCTGTCTCATTTATCAACAACACAACAAAATATGTTGAATACAATTCAACCAAGTAATAATGTAGATGCTGGGCAAGGAAATTCTATGAACTCTCAGCAAAAGCTGTCTGGGGAACTGCAGTATATTACCTCAGGTCAAAACTCAGGTTATTCCCATCATCAGTTGAAACAAATGAATCCTTTTCAGGTTGCTTCACCCAAACTCTTTCAGGTTGCGTCTCCTCAAATTCCACAACACTCATCTCCCCAAGTTGACCAACAAACTCATCAACAGTCTCTAGCAACAGTTGCAACTCCTCTTCAATCTTCTTACTCACCTTTTGGGCTCCCTGTTCCTTCCCCTCCCATGGCTCCATCTCCTAAGCTAGTAGATTCTGAGAAGCCCGTTCCTGGTGTTTCATCATCAAGTGCTGCTAATGTTGGGCAACATACAGGGGGTGCAGCATCACCAGCTCAAACCCTTGCCATAAGGACTCATGGGATATCAGCCTCTCCTTTATTGGCAGAATTCAGTGGTCTAGATGATGCCTATTTTAATGCTTTCACAATTACTTCTGGAAAAGATTTCGGGGAAGAATTTGGAAAAGAACTTTTGAAGGAGACGAGATCAAAAAAGATTGAGAAGTTGAAGAAGGAGGTTTTGGTTTCTTGGGATTGA 2433 0.4192 MLHLNLTRHRFPARILAYIPTHNNLGKILLAASCSPTATATTTESTDSLPAAATSYEAYAISDAATTTAEPSATKPVEYLSTISYANVICYAAFDDAQQQNLLQPNQLNTSQQSVMQTSSAMQPSTMQSILSSLQQNQQSNNVQQSTQSRLQQHSQIIRQQHQQNSIAQQQQQQPQNQQILYQQQQQFMKHMLSQMQQQQQQNLLQPNQLNTSQQSVMQTSSAMQLSTMQSILSSLQQNQQSNNVQKSTQSRLQQHSQIIRQQHQQNSIAQQQQTPMLQQLLINQQNNLTNIHQQLSGNDVPGLQQQQFGTDSGNQGIQTSHHFAQVLQQPKFSMQPQLQHNASKLLPSQSQQSQPQASPQQLMSQIHNQLALMQQQPSSLQKLQRYMQQNLQASGSLHQQQKQLYQSQRALPETSTSSVDSTAQTEQLSGGDWQEELYQRVQTMKEDYLPDLDEMFQEIAMKLQQYDPTPQQPKSDQIEKLRVYRLILERMILFLQLPKNSIGLSLKEKLGAYEKQIVHLISSFKLRKAISSLQPGQLPPTHMSSTPQSQSQVTSVQSHENQMIFQMQPSNLQGSAATLQQNNAASLQHNSLSHLSTTQQNMLNTIQPSNNVDAGQGNSMNSQQKLSGELQYITSGQNSGYSHHQLKQMNPFQVASPKLFQVASPQIPQHSSPQVDQQTHQQSLATVATPLQSSYSPFGLPVPSPPMAPSPKLVDSEKPVPGVSSSSAANVGQHTGGAASPAQTLAIRTHGISASPLLAEFSGLDDAYFNAFTITSGKDFGEEFGKELLKETRSKKIEKLKKEVLVSWD* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5907 810 MobiDBLite consensus disorder prediction 398 431 - -
Psa7g5907 810 MobiDBLite consensus disorder prediction 337 363 - -
Psa7g5907 810 MobiDBLite consensus disorder prediction 721 736 - -
Psa7g5907 810 MobiDBLite consensus disorder prediction 711 736 - -
Psa7g5907 810 MobiDBLite consensus disorder prediction 113 172 - -
Psa7g5907 810 MobiDBLite consensus disorder prediction 665 684 - -
Psa7g5907 810 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 97 171 IPR044661 GO:0003713|GO:0031490
Psa7g5907 810 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 632 782 IPR044661 GO:0003713|GO:0031490
Psa7g5907 810 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 167 278 IPR044661 GO:0003713|GO:0031490
Psa7g5907 810 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 279 629 IPR044661 GO:0003713|GO:0031490
Psa7g5907 810 MobiDBLite consensus disorder prediction 237 272 - -
Psa7g5907 810 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 632 782 - -
Psa7g5907 810 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 97 171 - -
Psa7g5907 810 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 167 278 - -
Psa7g5907 810 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED 279 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5907 Psa-Chr7 486654249 486660603 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5907 K14972 - gmx:100782132 425.246