Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa7g5904 | ATGGATTGGTTCTCATGGCTTTCAAAAACAAATCTTGATCCATCTCTTGTATATGAGTATGGCCTCACATTTTCACACAATGAGCTAGAACAAGAAGACATAGTTTACTTCAACCATGAGTTTCTCCAAAGCATGGGAATCTCCATAGCCAAACACAGGCTAGAAATTCTCAAGCATGCAAGAAAAGACAAATCAAAGAGACAACCACCGAGACCAGTTGCAAAGATCATGGTAGCAATCAAAAAGACAAAAAAGTGCTTAGCTGATTACATCATGAGAAAATTGGTTACATGTGAGGAATCAAATTCAGCACTTGTTGTTGTTCCAACATCAAGACCTAGTAATAGTGCTTATTATGGAACAAGATCATCATGGAAGAGTAGTTCTTTGAAGAGGAGTAATAAGAAGATGAAAGTGGAGAAACAAGAGAGGTTATTGCTTACAAATGGAAGTCCTAGTCCTACAATGATGCCTGGTTTTGCTCTAGATAGTTTTTCTAGTACTCCTATGGTTTATCATTTTCATGAAGGGAAGATGAAAGGAGAAGATGATGATAATAATGGTTATTGGTCTGCTGCTGTTGAAGATATCAGGTGGGATGCTATGTTTCAAGATCTAAAGCCAAATTAA | 630 | 0.3698 | MDWFSWLSKTNLDPSLVYEYGLTFSHNELEQEDIVYFNHEFLQSMGISIAKHRLEILKHARKDKSKRQPPRPVAKIMVAIKKTKKCLADYIMRKLVTCEESNSALVVVPTSRPSNSAYYGTRSSWKSSSLKRSNKKMKVEKQERLLLTNGSPSPTMMPGFALDSFSSTPMVYHFHEGKMKGEDDDNNGYWSAAVEDIRWDAMFQDLKPN* | 210 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa7g5904 | 209 | SUPERFAMILY | SAM/Pointed domain | 5 | 69 | IPR013761 | - | |
| Psa7g5904 | 209 | CDD | SAM_superfamily | 2 | 62 | - | - | |
| Psa7g5904 | 209 | Pfam | SAM domain (Sterile alpha motif) | 23 | 61 | IPR001660 | GO:0005515 | |
| Psa7g5904 | 209 | Gene3D | - | 1 | 68 | IPR013761 | - | |
| Psa7g5904 | 209 | PANTHER | OSJNBA0033G05.11 PROTEIN | 1 | 209 | - | - | |
| Psa7g5904 | 209 | PANTHER | OSJNBA0033G05.11 PROTEIN | 1 | 209 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa7g5904 | Psa-Chr7 | 486630482 | 486631792 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa7g5904 | - | - | pvu:PHAVU_010G157800g | 253.447 |
Event-related genes