Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5902 ATGGGTGGAGCGTGTTCTCGGAAGCAAGAGCAGGATGATGAAGATAATCTTAGTAGAGGATTTTCAAAGAAATATTGCAAATGCGGGAGTTTGAAATGGTGGACATCATCGTTTTCTTATCCATCCATGGATTTACGCGCACAAAAGGGAGAATGTCCATCACTGCTGGACTTGTGTGTCCAGAAAATAAGCGAGGATTTGGATAGACATAACACATTTTCTATGCTGCCACGTGATATAAGTCAGCAAATTTTAAATAATTTGGTCTACTCTCGTCGTCTTACTAGTGGTTCTCTTGAAGCTTTTAGAGATTGTGCTCTCCAGGATCTGTACTTGGGAGAATATGCCGGTGTTGATGATTCTTGGATGGATGTCATCTCATCTCAGGGTTCATCTTTACTCTCGGTAGATCTTTCTGGATCTGATGTCACTGATTTTGGATTGACTTACCTTAAAGATTGTCAAAGTCTCATTTCCTTAAATCTAAATTACTGTGACCAAATTTCAGATCATGGACTGGATTATATCAGTGGTCTGTCGAACTTGACATGTTTGAGTTTTAGAAGAAATGATTCAATATCGGCTCAAGGAATGAGTGCCTTCTCTAGTCTTGTTAACTTGGTCAAGTTGGATTTGGAGAGATGTCCTGGGATTCATGGAGGCATTGTCCATCTTCAAGGTTTAACTAAGTTGGAATCTCTCAATATGAAGTGGTGTAATTGCATAACAGATTCCGATATGAAGCCTCTATCAGAACTTGCAAACTTGATATGTCTAGAGATTTCATGTAGTAAAGTCACTGATTTTGGCATCAGTTTTCTAAGAGGGTTACAGAAGCTTGTCCTGTTGAATCTTGAAGGGTGCCTTGTATCATCTGCATGCTTGGATTCTCTTGCAGAGCTTCCTGCACTGTCAAATTTGAATCTAAATAGATGCAATATTTCTGACAGAGGGTGTGAAAAGTTTTCGAGACTGGAAATGTTGAAAGTATTAAACTTGGGATTTAATGACATAGGAGATACATGTTTAGCTCATTTGAAAGCATTGTCAAAGTTGGAGAGCTTGAACCTTGATTCATGTAAGATTGGTGATGAAGGATTGGTGAACTTGGCAGGTCATAAGCAATTGATCTGCTTGGAATTGTCTGATACGGAAGTTGGAAACAATGGCCTAGAGCATTTATCAGGATTGTCTAATCTGGAGAAAATAAATCTGTCCTTCACTGCTGTTAGTGATAGCGGTTTAAGGAAATTGTGTGGACTCTCATCTCTTAAGTCGCTTAATTTGGATGCTTACCAAATTACAGATGCTGGACTGGCAACCCTTACAAGTTTGACTGGCCTCACTGACCTTGATTTATTCGGCGCTCGAATCACAGATGTCGGGACAACTTATTTGAAAAAATTCAAGAACCTAAGGTCCTTGGAAATATGCAGTGGTGGATTGACTGATGCTGGTGTGAAAAATATCAAAGAGCTTACTTCGTTAAAGTGCTTAAATTTATCACAAAACAGTCACCTTACGAACAAAACAGTGGAGTTGATTGCTGGGCTCACTGGGTTGGTTTCTTTGAATCTTTCAAATTCGCGCATTACCTCGGCTGGACTGCAGCATTTGAAAACGCTGAAAAACTTGAGATCTCTGACATTGGAGTCTTGTAAGGTGACAGCAAACGACATAAAGAAAATTAAATCAATACACCTACCTAATTTGGTAAGCTTTAGGCCCGAGTAG 1734 0.395 MGGACSRKQEQDDEDNLSRGFSKKYCKCGSLKWWTSSFSYPSMDLRAQKGECPSLLDLCVQKISEDLDRHNTFSMLPRDISQQILNNLVYSRRLTSGSLEAFRDCALQDLYLGEYAGVDDSWMDVISSQGSSLLSVDLSGSDVTDFGLTYLKDCQSLISLNLNYCDQISDHGLDYISGLSNLTCLSFRRNDSISAQGMSAFSSLVNLVKLDLERCPGIHGGIVHLQGLTKLESLNMKWCNCITDSDMKPLSELANLICLEISCSKVTDFGISFLRGLQKLVLLNLEGCLVSSACLDSLAELPALSNLNLNRCNISDRGCEKFSRLEMLKVLNLGFNDIGDTCLAHLKALSKLESLNLDSCKIGDEGLVNLAGHKQLICLELSDTEVGNNGLEHLSGLSNLEKINLSFTAVSDSGLRKLCGLSSLKSLNLDAYQITDAGLATLTSLTGLTDLDLFGARITDVGTTYLKKFKNLRSLEICSGGLTDAGVKNIKELTSLKCLNLSQNSHLTNKTVELIAGLTGLVSLNLSNSRITSAGLQHLKTLKNLRSLTLESCKVTANDIKKIKSIHLPNLVSFRPE* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5902 577 Gene3D Ribonuclease Inhibitor 300 373 IPR032675 -
Psa7g5902 577 Pfam Leucine rich repeat 471 531 IPR001611 GO:0005515
Psa7g5902 577 SUPERFAMILY RNI-like 127 438 - -
Psa7g5902 577 Gene3D Ribonuclease Inhibitor 480 572 IPR032675 -
Psa7g5902 577 Gene3D Ribonuclease Inhibitor 220 299 IPR032675 -
Psa7g5902 577 Gene3D Ribonuclease Inhibitor 378 479 IPR032675 -
Psa7g5902 577 Gene3D Ribonuclease Inhibitor 119 219 IPR032675 -
Psa7g5902 577 PANTHER LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 4-LIKE 2 534 - -
Psa7g5902 577 SUPERFAMILY RNI-like 374 568 - -
Psa7g5902 577 SMART LRR_CC_2 493 518 IPR006553 -
Psa7g5902 577 SMART LRR_CC_2 422 445 IPR006553 -
Psa7g5902 577 SMART LRR_CC_2 228 253 IPR006553 -
Psa7g5902 577 SMART LRR_CC_2 397 421 IPR006553 -
Psa7g5902 577 SMART LRR_CC_2 349 373 IPR006553 -
Psa7g5902 577 SMART LRR_CC_2 301 325 IPR006553 -
Psa7g5902 577 SMART LRR_CC_2 519 542 IPR006553 -
Psa7g5902 577 SMART LRR_CC_2 154 179 IPR006553 -
Psa7g5902 577 Pfam Leucine Rich repeat 154 176 IPR001611 GO:0005515
Psa7g5902 577 Pfam Leucine Rich repeat 327 341 IPR001611 GO:0005515
Psa7g5902 577 Pfam Leucine Rich repeat 229 251 IPR001611 GO:0005515
Psa7g5902 577 Pfam Leucine Rich repeat 350 371 IPR001611 GO:0005515
Psa7g5902 577 Pfam Leucine Rich repeat 398 419 IPR001611 GO:0005515
Psa7g5902 577 Pfam Leucine Rich repeat 307 323 IPR001611 GO:0005515
Psa7g5902 577 Pfam Leucine Rich repeat 180 202 IPR001611 GO:0005515
Psa7g5902 577 PANTHER UNCHARACTERIZED 2 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5902 Psa-Chr7 486493383 486504296 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5902 393 550 Receptor kinase-like Gene Family AT5G51350 28.481 4.08e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5902 - - gmx:100795219 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5902 7 486493383 486504296 Psa7g5902 7 486493383 486504296 ECH