Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5891 ATGTCTGCTGCTGTGTGCGGAAGCAAGAGATCTTTCTTTGAAGAACTTCCTCCTTCTCCACCGTTATCCAAGAGGCTTCGTTGTTCCTCTGCTACTTCTCCGATTCGTTTTCCTACTCCTTCACTTTTCGACCAGCTTCGTAATCTCTTCCCTCACATGGAACAACAGGTTCTTGAGAGAGCTCTTCAAGAAAGTGACAATGATCTAGATGCTGCCATCAAGAGCCTGAATGAGCTTTACTTGGGAGCTGGGGGTGGGAATTATGGAACTGCTGAAGAATCAGAGATTGATGTCAGTGGGGATCAAGGTAAATTGGAAGATGATGTGAATGACTCTGCTTCTGAGAATCAGTCCACTTTGAACAACCTTCCTGCAGATGGAGCAGAATGGATTGACTTTTTTGTTCGAGAAATGATGGTTGCTACCAGTGTTGATGATGCTAGAGTCCGTGCTGCTAGAATGCTGGAGGTTCTAGAGAAATCAATCAGTGAACGAGCAAAGGCTGAGGCAACAGATTCTCTTCAGAAGGAAAATTTGATGCTGAAGCAGCAAATTGAAGTGCTGATTAAGGAGAAAAATTCTTTTAAAAACGCATTCAGGATTCAGCACGAACGCCTTTCTGATTATGATAATAAGAATCAAGAATTGCAGCAGTTGAAGCAGTTGGCGTCTCAATACCAGGAACAGATCAGAACTCTTGAGATGAATAACTATGCATTGGGAATGCATTTGAGGCAGGCTCAACAGAGCAACGGATTTCAAGGGAATTTCCCACCCGATGTCTTCTAA 789 0.4347 MSAAVCGSKRSFFEELPPSPPLSKRLRCSSATSPIRFPTPSLFDQLRNLFPHMEQQVLERALQESDNDLDAAIKSLNELYLGAGGGNYGTAEESEIDVSGDQGKLEDDVNDSASENQSTLNNLPADGAEWIDFFVREMMVATSVDDARVRAARMLEVLEKSISERAKAEATDSLQKENLMLKQQIEVLIKEKNSFKNAFRIQHERLSDYDNKNQELQQLKQLASQYQEQIRTLEMNNYALGMHLRQAQQSNGFQGNFPPDVF* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5891 262 SUPERFAMILY UBA-like 41 83 IPR009060 GO:0005515
Psa7g5891 262 Gene3D - 39 81 - -
Psa7g5891 262 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 262 - -
Psa7g5891 262 Coils Coil 209 236 - -
Psa7g5891 262 Pfam CUE domain 41 78 IPR003892 GO:0043130
Psa7g5891 262 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 262 - -
Psa7g5891 262 CDD CUE 41 76 - -
Psa7g5891 262 SMART cue_7 38 80 IPR003892 GO:0043130
Psa7g5891 262 Coils Coil 171 191 - -
Psa7g5891 262 ProSiteProfiles CUE domain profile. 38 81 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5891 Psa-Chr7 486054446 486060095 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5891 - - gmx:100813137 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5891 7 486054446 486060095 Psa7g5891 7 486054446 486060095 ECH