Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5887 ATGGCTTTGATAACTTCTCAGCCCAAAAACCCTATTCTCCATAATCACTTCACAACCTTTCATTCTTCAATTCCACAACTCAATAGGTCTATAGTGAATCTCGGGTCATTCTCAAAAAATTCAAAAGCTATTAAAGTTTGTAACTTTAACTCCAAGTCAAGAAATTTTCACTTGAGAAACAACCCCTTTAATTTTAATCCACAAATTGTAGCTAAACCCAATGCTGCAATTGGAGAAGTTGCTTCTTTGGAGCCAGAGGAATCACCATTGAAACATAGAAAGATTTTCCTATCTGATGTTGAAGTGAAGAGAGAAAAAAATGTGTTTTTTGGAAGGAAATGGAGTTCATTGGATATTGGAACTTTTGGTATTGTTTTGGGAATGCATTTGCTTTGCTTATTTGCTCCATTCAATTTCAATTGGCCAGCTTTTTGGGTTGCTGTTTCACTTTATGTTGTTACTGGACTTTTTGGTATCACTCTCTCTTTTCATAGGAATCTTTCTCATAAAAGCTTTAAGCTTCCTAAATGGCTTGAATATTTCTGTGCTTATTGTGGAGTTCTTGCTCTTCAGGGAAATCCAATTGATTGGGTGAGTACTCATAGGTATCACCACCAATTTTGTGATTCTGATAAAGACCCTCATAGCCCAATTGAAGGATTTTGGTTTAGTCATATGAGTTGGCTATTTGATACCAATTCTATTGTAGAAAGATGCGGAGAACCAACCAATGTTGGTGATTTAGAGAAACAATCTTTTTATAGATTTATAAGAAACACTTACATTGTGCATCCACTTGCTTTGGGAGCTCTTCTATATGCAATTGGTGGATTTCCTTTCCTTGTTTGGGGGATGGGTGTGAGAAGTGTTTGGGTTTACCACATTACTTGGTTTGTAAACTCGGCTTGCCATGTTTGGGGGAGTCAGTCTTGGAATACAAGGGACCTATCTAGAAATAATTGGTGGGTGGCTTTGCTTGCATTTGGTGAAGGTTGGCACAATAACCACCATGCATTTGAGTACTCAGCTAGACATGGTTTAGAGTGGTGGGAAATAGACATGACTTGGTACTTGGTGAAATTTCTTCAAGCTATTGGTTTAGCAACAGAGGTTAAAGTACCAAGTGAGAGTCAAAAGCAGAGAATGGCATTGAACAATAATGATGTGGTAGCCACATGA 1179 0.3757 MALITSQPKNPILHNHFTTFHSSIPQLNRSIVNLGSFSKNSKAIKVCNFNSKSRNFHLRNNPFNFNPQIVAKPNAAIGEVASLEPEESPLKHRKIFLSDVEVKREKNVFFGRKWSSLDIGTFGIVLGMHLLCLFAPFNFNWPAFWVAVSLYVVTGLFGITLSFHRNLSHKSFKLPKWLEYFCAYCGVLALQGNPIDWVSTHRYHHQFCDSDKDPHSPIEGFWFSHMSWLFDTNSIVERCGEPTNVGDLEKQSFYRFIRNTYIVHPLALGALLYAIGGFPFLVWGMGVRSVWVYHITWFVNSACHVWGSQSWNTRDLSRNNWWVALLAFGEGWHNNHHAFEYSARHGLEWWEIDMTWYLVKFLQAIGLATEVKVPSESQKQRMALNNNDVVAT* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5887 392 CDD Delta9-FADS-like 140 372 IPR015876 GO:0016717
Psa7g5887 392 PANTHER BNAC05G37460D PROTEIN 85 386 - -
Psa7g5887 392 Pfam Fatty acid desaturase 141 359 IPR005804 GO:0006629
Psa7g5887 392 PANTHER ACYL-COA DESATURASE 85 386 IPR015876 GO:0016717
Psa7g5887 392 PRINTS Fatty acid desaturase family 1 signature 164 184 IPR015876 GO:0016717
Psa7g5887 392 PRINTS Fatty acid desaturase family 1 signature 201 230 IPR015876 GO:0016717
Psa7g5887 392 PRINTS Fatty acid desaturase family 1 signature 286 307 IPR015876 GO:0016717
Psa7g5887 392 PRINTS Fatty acid desaturase family 1 signature 329 343 IPR015876 GO:0016717
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5887 43 387 Lipid Metabolism Gene Families AT3G15850 67.341 5.44e-176 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5887 K20416 - gmx:100786391 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5887 7 486007303 486010091 Psa7g5887 7 486007303 486010091 ECH