Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5875 ATGAAGAAGGAATCGCGAAGTGATGCCAAAGATCAACTCTCTTCGGTTCAGCTTTCAGCTCCTCCTTCTTGGAAGAAACTGTACTTCCCTAAGAAAGCAGGAACACCAAGGAAAGGCGAGATTGTATTCGTTGCTCCAACTGGAGAAGAGATAACCTCCAGAAGACAATTGGAGCGGTACCTAAAATCACATCCTGAGAATCCTAACATATCAGAATTTGATTGGGGAACCAGTGACACACCAAGACGATCATCAAGGATTAGTGAGAAGGTCAAAACAACTTCACCTGCAGAAGCCGAGCCTCCGAAGAAACGCGGTCGAAAATCAATTGGTTCACAGAAGGAAGACAAGGTAACCGAAACTGAAGCTCATTCCGAGGAAGCTGAGCCTCCGAAGAAACGCGGTCGTAAATCAATTGGTTCAAAGAAGGATGACAAGGTAACAAAAACTGAAGCTCATTCCGAGAAAGCCGAGCCTCCAAAGAAACGCGGTCGAAAATCATCTGCTTCAAAGAAACATGACAAGGAGACCGAAACTGAATTTCCTTCAGAGGAAGCCAAGGAAAAGGGAAAGTCTTCTGCAGAAGAACCAAAAGCCGATCCAGTTGATGCTGATGACAACATCGGTGATAAAGTAAAGAGTGATGATGCAGAAGTAATTAAGCAAAGTAAAGCAGAAGGTGAACTTGTTCAAGAACCTTTGAAGGCTGTGGTCGAGGAGGAGATAGTTGAATCGGCAAAGGAAAAGTCTTCTGCTGAAGAACCTAAAGCTGATCCAATGGACACTGATGAAAATGTCAATAATAAAACAAGGAGTGATGATGCCGAGGAAATTAAGCAAAGTAATGCAGAAGGTGAACATGTTATTGTAGCTTCAAATGCTGTGGTTGAAGAAGCAATAGCTGAATCGGCAAAGGAAAAGTCTTCTGCGGAAGAACTGGAAGCCGATCCAATGGACACTGATGACAATGTCAATGATAAAACAAGGAGTGATGATGTGGAGGAAATTAAGCAAAGTAATGCAGAAGGTGAACTTGTTCAAGAAGATTTGAATGCTGTGTCTGAGGAGACAATAGTTGAATCGGAAAAGGAAAATCCTTCTGCAGAAGAACTGGATGCTGATCCGGTGGATGCAGATAGCAACATCTATGATAAAACAAAAAGTAATGATGCAGATGAAATTAAGCCTAGTAATACAGAAGGTGAACTTGTTCAAGAAGCTTCGAATGCTGTGGTCGAGGAGGCAATAGTTGAGTCGGAAAAGGAAGTGTCTTCTGCAGAACCAAAAGCCGATCCAATGGATGCTGATAGCAACATTGATGATAAAACAAAGAGTAATGATGCAGAGGAAATTAAGCAAAGTAATACAGAAGGTGAACTTGTTCAAGAAGCTTCGAATGCCGTGGTCGAGGAGGCAATAGTTGAGTCGGAGAAGGAACTGTCATCTGCAGAACCAAAAGCTGATCCAATGGACGCTGATAGCAACATTGATGATATAACAAAGAGTAATGATGCAGAGGAAATTAAGCAAAGTAATACCGAAGGTGAACTTGTTCAAGAAGCTTCGAATGCCGTGGTCGAGGAGGCAATAGTTGAATCTGAAAAGGACCTGTTTTCTGCAGAAGAACCGAAAGCTGATCCAGTTGATGCTGATAACATAATCATTGATAACACAAAGATTGATGATGCCGAGGAAATCAAGCAAGGTAATGTGGAAGCTGAAAATTTGACTGTTGAGAACCCTCAAGTGGAAGAAACACCAATGGCAGAACCAGAGGAACAACTTGCTGAAGAAGCTTTGAATGCAGTGGTTGCTGAAAAAACACAAGAGGAGGCCCCAGTTGAATTGGAGAAAGAAAATGGTACAATTGACAGTAGTAAGCAGGAAAAATCAGGCGCTGAGGAAAACGAAGGAGCTGAAAAAGCGAGTCTCAACTTTGAAGAAATTAATGGCAAGAATGAAATTCCAGCAAGTGATGAGAAACAAACAATTCAAGGTGAGGAGCAAGTGAAGATGGGTGACAATGAAAGCTTTATTTGGAGCTTTGCTCAATGA 2055 0.4204 MKKESRSDAKDQLSSVQLSAPPSWKKLYFPKKAGTPRKGEIVFVAPTGEEITSRRQLERYLKSHPENPNISEFDWGTSDTPRRSSRISEKVKTTSPAEAEPPKKRGRKSIGSQKEDKVTETEAHSEEAEPPKKRGRKSIGSKKDDKVTKTEAHSEKAEPPKKRGRKSSASKKHDKETETEFPSEEAKEKGKSSAEEPKADPVDADDNIGDKVKSDDAEVIKQSKAEGELVQEPLKAVVEEEIVESAKEKSSAEEPKADPMDTDENVNNKTRSDDAEEIKQSNAEGEHVIVASNAVVEEAIAESAKEKSSAEELEADPMDTDDNVNDKTRSDDVEEIKQSNAEGELVQEDLNAVSEETIVESEKENPSAEELDADPVDADSNIYDKTKSNDADEIKPSNTEGELVQEASNAVVEEAIVESEKEVSSAEPKADPMDADSNIDDKTKSNDAEEIKQSNTEGELVQEASNAVVEEAIVESEKELSSAEPKADPMDADSNIDDITKSNDAEEIKQSNTEGELVQEASNAVVEEAIVESEKDLFSAEEPKADPVDADNIIIDNTKIDDAEEIKQGNVEAENLTVENPQVEETPMAEPEEQLAEEALNAVVAEKTQEEAPVELEKENGTIDSSKQEKSGAEENEGAEKASLNFEEINGKNEIPASDEKQTIQGEEQVKMGDNESFIWSFAQ* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5875 684 Coils Coil 616 636 - -
Psa7g5875 684 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 10 80 IPR001739 GO:0003677
Psa7g5875 684 MobiDBLite consensus disorder prediction 378 399 - -
Psa7g5875 684 MobiDBLite consensus disorder prediction 96 225 - -
Psa7g5875 684 MobiDBLite consensus disorder prediction 415 456 - -
Psa7g5875 684 MobiDBLite consensus disorder prediction 1 495 - -
Psa7g5875 684 CDD MeCP2_MBD 20 84 - -
Psa7g5875 684 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 7 128 IPR039622 -
Psa7g5875 684 MobiDBLite consensus disorder prediction 607 684 - -
Psa7g5875 684 MobiDBLite consensus disorder prediction 610 642 - -
Psa7g5875 684 SUPERFAMILY DNA-binding domain 11 102 IPR016177 GO:0003677
Psa7g5875 684 MobiDBLite consensus disorder prediction 233 283 - -
Psa7g5875 684 MobiDBLite consensus disorder prediction 300 342 - -
Psa7g5875 684 MobiDBLite consensus disorder prediction 472 495 - -
Psa7g5875 684 MobiDBLite consensus disorder prediction 356 370 - -
Psa7g5875 684 Gene3D - 1 112 - -
Psa7g5875 684 MobiDBLite consensus disorder prediction 566 592 - -
Psa7g5875 684 Pfam Methyl-CpG binding domain 15 77 IPR001739 GO:0003677
Psa7g5875 684 Coils Coil 296 316 - -
Psa7g5875 684 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11-LIKE 7 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5875 Psa-Chr7 485557081 485562602 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5875 - - vvi:100249094 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5875 7 485557081 485562602 Psa7g5875 7 485557081 485562602 ECH