Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5860 ATGAAGGCCATTGAAGCCTTACACCTACGGTGTATGCTTCCACTATCTATCACCAAAAAAACTCTCTTTACACACCAATCACCAACCCCATTATCATCCATTTCAAACCCACAATTGAGTTTAACCTTATCATCTTCTCAAACTGCTACTGTCAGAACAAGAGCAGGTTGGTTTTTGGGTCTTACAAAGGACAATAACAACAAGAAGGTGAATTTGCCTGATACTGTTAAAGCTGGTGACCCTGTTCTTCATGAGCCTGCTCAAGAAGTTGATCCTAGTGAGATTAAGTCTGAGAAAGTGCAGAAAATTATTGATGATATGATTAGGGTCATGAGGAAAGCTCCTGGTGTTGGGTTAGCTGCTCCACAGATTGGAATTCCTTCTAGGATAATTGTTTTGGAAGATACCAAAGAGTATATTAGTTATGCACCAAAGGAAGAGACCAAAGCTCAAGATAGAAGACCTTTTGATCTTTTGGTGATCCTGAATCCCAAACTGAAGAATAAGAGCAACAAGACTGCCCTATTTTTTGAAGGGTGTTTGAGTGTTGATGGATTTAGAGCTGTGGTGGAGCGATACCTTGACGTTGAAGTTACAGGTTTGGATCGTAATGGCGAACCGATTAAAATAACTGCTTCTGGTTGGCAGGCCCGGGTTTTGCAACATGAATGTGATCACTTGGAGGGAACTCTATATGTCGATAAGATGGTACCTAGAACTTTCAGAACCGTAGAAAACTTGGATCTGCCTCTTGCTCAAGGGTGCCCGAAACTTGGCCCTTGGTAA 786 0.4173 MKAIEALHLRCMLPLSITKKTLFTHQSPTPLSSISNPQLSLTLSSSQTATVRTRAGWFLGLTKDNNNKKVNLPDTVKAGDPVLHEPAQEVDPSEIKSEKVQKIIDDMIRVMRKAPGVGLAAPQIGIPSRIIVLEDTKEYISYAPKEETKAQDRRPFDLLVILNPKLKNKSNKTALFFEGCLSVDGFRAVVERYLDVEVTGLDRNGEPIKITASGWQARVLQHECDHLEGTLYVDKMVPRTFRTVENLDLPLAQGCPKLGPW* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5860 261 CDD Pep_deformylase 76 232 IPR023635 GO:0042586
Psa7g5860 261 TIGRFAM pept_deformyl: peptide deformylase 76 239 IPR023635 GO:0042586
Psa7g5860 261 Hamap Peptide deformylase [def]. 71 247 IPR023635 GO:0042586
Psa7g5860 261 PANTHER PEPTIDE DEFORMYLASE 19 260 IPR023635 GO:0042586
Psa7g5860 261 Gene3D Peptide deformylase 70 259 IPR036821 -
Psa7g5860 261 PANTHER PEPTIDE DEFORMYLASE 19 260 - -
Psa7g5860 261 PRINTS Peptide deformylase signature 105 134 IPR023635 GO:0042586
Psa7g5860 261 PRINTS Peptide deformylase signature 178 189 IPR023635 GO:0042586
Psa7g5860 261 PRINTS Peptide deformylase signature 190 208 IPR023635 GO:0042586
Psa7g5860 261 PRINTS Peptide deformylase signature 209 238 IPR023635 GO:0042586
Psa7g5860 261 Pfam Polypeptide deformylase 76 239 IPR023635 GO:0042586
Psa7g5860 261 SUPERFAMILY Peptide deformylase 73 244 IPR036821 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5860 Psa-Chr7 485147892 485151572 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5860 K01462 - gmx:100784292 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5860 7 485147892 485151572 Psa7g5860 7 485147892 485151572 ECH