Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5855 ATGGCGTTTTTCTCCGCAACTGCAACCGTTCCTCAAAAACTCACCTTCGTTTCCTCTACCAAACTCTCATCTTCTTCTACGTCGTCGTTTAACTTCCTTTCATTTCCCTCATTTCAATCCAACTTCTGCAAAACCATAACCGCCTCCCCACAATTTCCACGCGCCCACGCGCTTCCTTCTTCCGCAGCTACAACCACCGCCGCCTCATCCTTCCATGGCATCTGCTATGTCGTCGGCGACAACATCGACACTGATCAGATCATTCCCGCCGAACATCTCACTCTTGTCCCTTCCAAGCCCGACGAGTACGAGAAGCTAGGTTCCTTCGCCCTAATCGGACTTCCCGATGCATACTCCGTCCGATTTGTTGAACCCGGTGAGACTAAAACCAAATACTCCATTGTCATCGGCGGTGCTAATTTTGGTTGCGGATCCTCCCGTGAGCACGCGCCGGTTGCGTTAGGTGCCTCCGGTGTTGCTGCTGTTGTGGCTGAATCCTACGCGCGGATCTTTTTCAGAAACTCGGTGGCTACTGGTGAGGTGTATCCATTGGAGTCAGAGACGCGGTTGTGTGAGGAGTGTCACACGGGAGATGTGGTGACAGTTGAGCTCGAGGAGAATCGTTTGATCAATCACACTACTGGAAAGGAGTATCAGTTGAAGCCCATTGGAGATGCTGGTCCGGTCATTGAAGCCGGTGGTATCTTCGCCTATGCTAGGAAAACCGGCATGATTCCTACTCGATAA 747 0.5167 MAFFSATATVPQKLTFVSSTKLSSSSTSSFNFLSFPSFQSNFCKTITASPQFPRAHALPSSAATTTAASSFHGICYVVGDNIDTDQIIPAEHLTLVPSKPDEYEKLGSFALIGLPDAYSVRFVEPGETKTKYSIVIGGANFGCGSSREHAPVALGASGVAAVVAESYARIFFRNSVATGEVYPLESETRLCEECHTGDVVTVELEENRLINHTTGKEYQLKPIGDAGPVIEAGGIFAYARKTGMIPTR* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5855 248 CDD IPMI_Swivel 77 204 IPR033940 -
Psa7g5855 248 Pfam Aconitase C-terminal domain 132 179 IPR000573 -
Psa7g5855 248 Gene3D Aconitase, domain 4 68 244 IPR015928 -
Psa7g5855 248 TIGRFAM LEUD_arch: 3-isopropylmalate dehydratase, small subunit 75 241 IPR011827 GO:0016836
Psa7g5855 248 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED 1 246 - -
Psa7g5855 248 PANTHER 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATED-RELATED 1 246 - -
Psa7g5855 248 SUPERFAMILY LeuD/IlvD-like 71 245 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5855 K01704 - gmx:100809737 334.339