Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5845 ATGGTGAAGGACAAGTTAAAGGAACATGTTCTTACAGCTTTCACAACTAATGGTGACTATGTTGCCATTTTGTCTGCAAATGGGACGGCCAAAATTTGGAATACAAATAGTGGAGATTTGTTAGCGGATTGGAGGCCATCAGATGGAGATGAAGATACCCGTTACTCTTGTATTGCATGCAGTTTCACTGGGAAAAAGCGTAGAAAAGATCAGGGAACTTGCATATTAGCTCTCGGCACAGATGATGGAGAAGTTCTCGCTGTTGATGTTTCCACTGGTGATAGGAAGTGGCCTACTAGTCATACAATTCCCAGTGGGATTTGCGGACTTTCATTTGCAAAAAAAGGACAGCTTCTTTGTGTTGTTGGACATGATGGGAAGGCTTATGAGATTAATTCTGAAACAGGAGAGCTTCTAAAGGAGTTCAGAGTCTCAAAAAAGTCCATCTCTTCACTGGCTTTCTCACATGATGAAAAATACTTGGCAATTTTCAGCTCTAGACTACGAGTTATAAGCCGGGAAACTGGGAAAGAGGTTTTGAAGTGCCCTAGTGATTTGGAAAATATAGACCGTGTTTCTCTATCCAATGACGCAAAATATTTAATTACATCAGATTCCGAGGCAAAACATCTTAAAGTTTGGAAGTGTGACTTAAGTTCAGGAACTGTGAGTTCTGGTCCAACACTTTCGTCAAGGCATGCTCCATTGGTTCTTGATTGCCACCTCGGTGGCAATGAAGAAGATGATTTAGTTGTCTCGGCAGTTACTTCAGGGGGAACATACATATGGAAGAATTTGAATGCTTCTTCCGAAGATCAGGTACACCGAACTAAAATAACCTCAAAAACAGAAAAAGTTGAAAGTGAAAAGGAAAATGGTGTAAGTTCAAAGAAAAAGCGCACTTCTATAATTGCATCGAGATTTCAATCCACGGGGGAAGACGGTCAGATGAAAGCTTTGGTGACTTATGGCTCTGCAGATCATCCAAAATTTACTGTCTTAAATATTAGCGATTTAGGGGAGAATGTGGTATTAAATGTGGGAGACGAGCTTGATTCCATTCAGAAGCATGACAGTCCTTCTAAGAAAGTCGAAAAGGAAAGCAAGAAATCTAAGAAAAGACAAGCAACATCTGATCCTGATCTTCCAACCACCACTGACAAGTTGGACTTCGATCAACTTGAGGATGCCGAAGGAGTCCTTGATGATGATCCGAGTGAGCCAACAATGGGAGAGAAACTTGCTAGTCTCAATTTGGTTGATGAACACAAATCCAAGAGTGACAAAGAGCAAGAATCTTTGGTCTCATTGAAGCCTCCAAGTGCAGACAGTGTAGATGTTTTGCTTAAGCAAGCATTAAATGCTGATGATCGAGCCCTTCTGCTGGATTGCTTGTATACGCAAGATGAGAAGGTTATTATTAAGTCAGTTGCGCAGTTAAACCCATCCAATGTCCTCAAACTTCTTAATTCTCTTATAACCATTATTGAGTCTAGGGGTGCAATTTTAGCATGTGCTCTTCCATGGCTGAAGTGTCTACTTCTACAGCATGCAAGTGGAATAATGTCCCAAGAATCTTCATTAAAAGTTTTGAACTCTTTGTTTCAACTGATTGAGTCTAGAGTCTCCTCTTTTAAATCTGTCTTCCAACTCTCAAGTTTCTTAGACATCCATTACACCGGGGTTCTCGATGAAGAGGTAGATGAAGTTGAAACAGTGCCGATTATCTACGTGGACACAGATGATAGTGAAGGCGAAGAATCCGAGGATGTCATGGAAACTGACCAAGATAGCAAGGATGGAGAACTATCAGACGAAGCATTGGATAATCTTAATGACATTGAAGGTAGTGATGGTATGATGGAAGATTAA 1872 0.4071 MVKDKLKEHVLTAFTTNGDYVAILSANGTAKIWNTNSGDLLADWRPSDGDEDTRYSCIACSFTGKKRRKDQGTCILALGTDDGEVLAVDVSTGDRKWPTSHTIPSGICGLSFAKKGQLLCVVGHDGKAYEINSETGELLKEFRVSKKSISSLAFSHDEKYLAIFSSRLRVISRETGKEVLKCPSDLENIDRVSLSNDAKYLITSDSEAKHLKVWKCDLSSGTVSSGPTLSSRHAPLVLDCHLGGNEEDDLVVSAVTSGGTYIWKNLNASSEDQVHRTKITSKTEKVESEKENGVSSKKKRTSIIASRFQSTGEDGQMKALVTYGSADHPKFTVLNISDLGENVVLNVGDELDSIQKHDSPSKKVEKESKKSKKRQATSDPDLPTTTDKLDFDQLEDAEGVLDDDPSEPTMGEKLASLNLVDEHKSKSDKEQESLVSLKPPSADSVDVLLKQALNADDRALLLDCLYTQDEKVIIKSVAQLNPSNVLKLLNSLITIIESRGAILACALPWLKCLLLQHASGIMSQESSLKVLNSLFQLIESRVSSFKSVFQLSSFLDIHYTGVLDEEVDEVETVPIIYVDTDDSEGEESEDVMETDQDSKDGELSDEALDNLNDIEGSDGMMED* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5845 623 MobiDBLite consensus disorder prediction 278 297 - -
Psa7g5845 623 MobiDBLite consensus disorder prediction 607 623 - -
Psa7g5845 623 MobiDBLite consensus disorder prediction 354 392 - -
Psa7g5845 623 MobiDBLite consensus disorder prediction 580 596 - -
Psa7g5845 623 PANTHER OS01G0649000 PROTEIN 65 621 - -
Psa7g5845 623 MobiDBLite consensus disorder prediction 278 309 - -
Psa7g5845 623 MobiDBLite consensus disorder prediction 580 623 - -
Psa7g5845 623 Gene3D - 11 370 IPR015943 GO:0005515
Psa7g5845 623 Pfam Anaphase-promoting complex subunit 4 WD40 domain 75 155 IPR024977 -
Psa7g5845 623 Pfam Dip2/Utp12 Family 457 553 IPR007148 -
Psa7g5845 623 SMART WD40_4 135 172 IPR001680 GO:0005515
Psa7g5845 623 SMART WD40_4 175 215 IPR001680 GO:0005515
Psa7g5845 623 SMART WD40_4 4 34 IPR001680 GO:0005515
Psa7g5845 623 SMART WD40_4 96 132 IPR001680 GO:0005515
Psa7g5845 623 MobiDBLite consensus disorder prediction 354 377 - -
Psa7g5845 623 PANTHER WD REPEAT-CONTAINING 65 621 - -
Psa7g5845 623 SUPERFAMILY WD40 repeat-like 13 266 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5845 K14546 - gmx:100796828 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5845 7 484661392 484667030 Psa7g5845 7 484661392 484667030 ECH