Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5838 ATGCGATTAACTTCTTCAATGGGATTCGGGTCGGGTTCTCTAATGTGGTTCCGAAAGGGTATTCGGATCCACGATAACCCGGCACTCGATTATGCTTCCCGAGGATCTTCTCATCTTTATCCTCTTTTCATTATTGACCCGCATTACATGAAACCCGACCCGAATGCTTTCTCGCCCGGTTCTTCTCTAGCGGGTCTCAACCGTATCAATTTCTTGCTTCAAAGCCTTACCGACCTTGATCTTAACCTCAAGAAGCTTGGTTCTCGATTGTTGATACTTAAGGGTGATCCTCACGAGGTTCTCATTCGATGCTTGAAAGAGTGGAACATTGGAAAATTATGCTTTGAGTATGACACTGATCCATATTATCAAGCTCTGGATATTAAAATCAAGGACTATGCCCTTAAGGCAGGGATTGAGGTTTTCTCTCCTGTAAGCCACACACTTTTTGATCCATCAGATATTATACAGAAGAATGGAGGGAAGCCGCCGCTTAGTTATCAATCATTTGTCAAGCTTGCGGGGGAGCCGCCATCTCCACTCTCGACCAAGTATTCTTCACTTCCTCCGGTTGGCCATCTTGGAAGTTGCGAGATTTCTGAAGTTCCATCTGTCAAAGATCTTGGATACGAAGATGCTAAACTGGGGGAGTTCTCTCCTTTCATAGGAGGTGAATCGGAAGCGTTGAAGAGATTGGAAAAATGCATGAAAGACAAGAAATGGGTGGCAAATTTTGAGAAACCTAAGGGCAATCCATCTGCATTTCTTAAGCCAGAAACCACTATTTTATCACCTTACTTGAAATTTGGTTGTCTCTCTTCCAGATATTTCTACCAATGCATTCAAGATGTATATAAAAGTTTGCCAAAACATACGTCACCTCCTGTTTCTCTTCTAGGACAGTTGTTGTGGCGAGAGTTCTTTTACACAGCAGCTTTCGGGACTCCAAATTTTGATAGGATGAAAGGCAATAGGATATGCAAGCAGATTCCTTGGAAGGATGATGATAAACTTCTGGAGGCTTGGAGAGATTCTAAGACAGGGTTTCCATGGATTGATGCTATCATGGTCCAGCTACGCCAATGGGGCTGGATGCATCATTTGGCACGACATTCTGTTGCTTGTTTTCTAACTCGAGGGGATCTGTTTGTTCATTGGGAAAAAGGACGTGATGTCTTTGAGAGGCTTCTGATTGATTCAGATTGGGCCATTAATAACGGAAACTGGATGTGGCTCTCATGTTCATCTTTCTTCTATCAGTATAATCGTATTTATTCCCCGACCACATTTGGTAAGAAGTATGACCCTAATGGTGACTTTATTAGGCATTTTCTCCCAGTCTTAAAAGATATGCCGAAGGCGTACATCTATGAACCATGGACTGCTCCTCCAAGCATCCAGACCAAAGCAAATTGCATAATTGGAAAAGATTACCCAATGCCAGTTGTTTCTCACGACTCTGCAAGTAAAGAGTGCAAAAGGAAAATGGGCGAGACATATGCATTGAATAAAGCACTGAATGGTTTGGTTAGTGAAGATGATCTGAAAACCTTGAGGAGGAAATTGGACGAAGGTGAAGAACCAGAAACAAAAGCTAAAAGATCCAGGCAACTGCTAATTGGCTGA 1626 0.4268 MRLTSSMGFGSGSLMWFRKGIRIHDNPALDYASRGSSHLYPLFIIDPHYMKPDPNAFSPGSSLAGLNRINFLLQSLTDLDLNLKKLGSRLLILKGDPHEVLIRCLKEWNIGKLCFEYDTDPYYQALDIKIKDYALKAGIEVFSPVSHTLFDPSDIIQKNGGKPPLSYQSFVKLAGEPPSPLSTKYSSLPPVGHLGSCEISEVPSVKDLGYEDAKLGEFSPFIGGESEALKRLEKCMKDKKWVANFEKPKGNPSAFLKPETTILSPYLKFGCLSSRYFYQCIQDVYKSLPKHTSPPVSLLGQLLWREFFYTAAFGTPNFDRMKGNRICKQIPWKDDDKLLEAWRDSKTGFPWIDAIMVQLRQWGWMHHLARHSVACFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYNRIYSPTTFGKKYDPNGDFIRHFLPVLKDMPKAYIYEPWTAPPSIQTKANCIIGKDYPMPVVSHDSASKECKRKMGETYALNKALNGLVSEDDLKTLRRKLDEGEEPETKAKRSRQLLIG* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5838 541 MobiDBLite consensus disorder prediction 521 541 - -
Psa7g5838 541 PANTHER (6-4)-PHOTOLYASE, ISOFORM A 13 506 - -
Psa7g5838 541 PANTHER CRYPTOCHROME 13 506 IPR002081 -
Psa7g5838 541 Gene3D - 147 309 - -
Psa7g5838 541 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 211 501 IPR036134 -
Psa7g5838 541 Gene3D HUPs 14 223 IPR014729 -
Psa7g5838 541 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 316 540 - -
Psa7g5838 541 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 11 149 IPR006050 -
Psa7g5838 541 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 13 191 IPR036155 -
Psa7g5838 541 Pfam DNA photolyase 13 174 IPR006050 -
Psa7g5838 541 Pfam FAD binding domain of DNA photolyase 300 496 IPR005101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5838 Psa-Chr7 484530111 484535609 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5838 K02295 - gmx:100780347 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5838 7 484530111 484535609 Psa7g5838 7 484530111 484535609 ECH