Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5799 ATGATGGAGCTTATTTCGGGTCTACCCGAAGACGTAGCCCGAGACTGTCTAATTCGGGTTTCATACCAACAGTTTCCGGCGGTGGCTTCGATATGTAAAGGGTGGAAGAAAGAGATACATACACCGGAGTATCACCGTCAACGGCGGAGAACAGGACATGCTCAAAAGGTTTTAGTTATGGTTCAAGCACGTGTTGAACCGGAGAAAACAGAAACCGGTTCGACTAAAAGACTTACAAACCCGGTTTACCGGCTTAGTGTATTTGAACCGGAAACTTGTAGCTGGAGTGAGTTACCAGCGCCACCCGGTTATAGTTCAGGGTTACCGGTGATGTGTCAGTTAGCATGCGTGGGTTATGATCTTGTCGTGTTGGGTGGGTTAGATCCGGAATCATGGAAAGCATCGAATTCTGTGTTTGTTTATAATTTCTTGTCGGCGAAGTGGCGTTGTGGGACCCACATGCCAGGTGGAGCTAGAACGTTTTTCGGTTGCTCGTCGGATGGTTGCCGGAATGTTTTTGTCGCCGGTGGTCATGATGATGAGAAAAACGCGCTGAGGTCGGCGTTGGTTTATGATGTTGTGGCGGATGAGTGGGTTGAGCTTCCGGAGATGTCGTCGGAGCGTGATGAGTGTAAGGCGGTGTTCCGCCGTGGGAGGTTTGCGGTCGTCGGTGGTTACAAAACGGAGAATCAAGGGAGATTTGAAAGAAGCGCGGAAGCGTTCGATTTTATGACGTGGAAGTGGGGTCAAGTTGAGGAAGAGTTTTTGGATTGTGCCACGTGTCCTATGACTTTGGTCGACGGTGGAGATGGTGGTGAGAGTGTTTATATGTGTTGTGGCGGGGAGTTAGTTGCGATGAGGAGTCACACGTGGCAGAAGATGGGGAATGTTCCGGATGAGATACGCAACGTGGCGTATGTTGGAGCTGAGAGTGTTTATATGTGTTGTGGCGGGGAGTTAGTTGCGATGAGGAGTCACACGTGGCAGAAGATGGGGAATGTTCCGGATGAGATACGCAACGTGGCGTATGTTGGAGCGTTTGATGGGTTTGTGGTTGTGATTGGATCAAGTGGATATGGGGAAGTGCATATGGGTTATGTTTTTGATGTGATGAGATGTAATTGGAGAAAACTGGATTATCCAGATGGGTTTAAGGGACATGTCCAAACCGGTTGTGTTTTAGAAATTTAG 1191 0.4878 MMELISGLPEDVARDCLIRVSYQQFPAVASICKGWKKEIHTPEYHRQRRRTGHAQKVLVMVQARVEPEKTETGSTKRLTNPVYRLSVFEPETCSWSELPAPPGYSSGLPVMCQLACVGYDLVVLGGLDPESWKASNSVFVYNFLSAKWRCGTHMPGGARTFFGCSSDGCRNVFVAGGHDDEKNALRSALVYDVVADEWVELPEMSSERDECKAVFRRGRFAVVGGYKTENQGRFERSAEAFDFMTWKWGQVEEEFLDCATCPMTLVDGGDGGESVYMCCGGELVAMRSHTWQKMGNVPDEIRNVAYVGAESVYMCCGGELVAMRSHTWQKMGNVPDEIRNVAYVGAFDGFVVVIGSSGYGEVHMGYVFDVMRCNWRKLDYPDGFKGHVQTGCVLEI* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5799 396 Gene3D - 12 285 IPR015915 GO:0005515
Psa7g5799 396 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 311 396 - -
Psa7g5799 396 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 2 309 - -
Psa7g5799 396 SMART kelc_smart 120 168 IPR006652 GO:0005515
Psa7g5799 396 SMART kelc_smart 171 218 IPR006652 GO:0005515
Psa7g5799 396 Pfam Kelch motif 114 155 IPR006652 GO:0005515
Psa7g5799 396 Pfam Kelch motif 172 205 IPR006652 GO:0005515
Psa7g5799 396 SUPERFAMILY Kelch motif 80 378 IPR015915 GO:0005515
Psa7g5799 396 PANTHER OS02G0208700 PROTEIN 2 309 IPR044595 GO:0080037|GO:2000762
Psa7g5799 396 PANTHER OS02G0208700 PROTEIN 311 396 IPR044595 GO:0080037|GO:2000762
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5799 Psa-Chr7 483680382 483682036 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5799 - - ccaj:109808365 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5799 7 483680382 483682036 Psa7g5799 7 483680382 483682036 ECH