Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5729 ATGCGAGGGAGACAGCGACTAGGATCAAGGGAAACCATAACAGTGCATGATAGTAAAGATGAAAATTCAGCTTCAGTACGTGTACCGAGTGCCAAACCTTGTTGGCGGCGCTCTTTGAGGCATGTATTAGTGGCTTCTCTTTCCTCATTCTTATATGGATACCATGTTGGGGTAGTCAATGAAACCTTAGAAAGCATTTCTATAGATCTCGGTTTTAGCGGAAATACATTGGCGGAAGGTCTGGTAGTAAGTATATGTTTAGGAGGTGCTTTTATTGGATCTCTATTCAGTGGATGGATCGCAGATGGGGTTGGGCGTAGAAGAAGTTTCCAGTTGTGTGCTTTGCCTATGATCATTGGGGCCATAATGAGTGCCACAGCAAAATCCCTCTGGGGCATGCTTTTAGGAAGATTATTTGTTGGTACTGGAATGGGACTTGGCCCTCCTGTTGCAGCTCTTTATGTGGCGGAGGTCTCACCTCCAGCTGTGCGTGGTACTTTTGGGGGCTTAACGCAAATTGCAACATGTCTTGGACTCATGGCGGCTCTCTTTATAGGAATCCCAGCCAAAGAAATAGTTGGTTGGTGGCGGATTTGTTTCTGGGCATCTGTCATCCCTGCTGTTATACTCACTATTTTCATGGAGATCTGTGCAGAGAGTCCTTATTGGCTTTTCAAGAGAGGAAGAACCATTGAAGCAGAAGCTGAATTTGAGAAGCTCTTGGGAGGACTACACGTGAAACCTGCAATGGGCGAACTGTCAAAGTCTGACAGAGGTGATGAGTCTGGTGCAGTAAAACTCTCAGAATTATTGTTTGGCTGCCATGCCAGAGTGATGTTCATTGGATCGGCGCTTTTTGCTTTGCAGCAACTGTCTGGCATAAATGCTGTTTTCTATTTCTCTTCAGCAGTCTTTGAAAGCTTTGGTGTACCATCTAAGATGGGAAATACGTGTGTTGGAATATGCAATTTATTTGGATCGGTTGTTTCAATGATTCTAATGGATAAACTTGGAAGGAAAGTGCTTTTACTGGGTAGCTTTTTAGGCATGGCAGTAACAATGGGTCTACAAGTCATTGCTGCTAGTTCTTATGCATCAGGATTTGGAGCAATGTATATATCTGTCGGTGGCATGTTGCTGTATGTACTATCATTTGCTCTTGGTGCTGGTCCGGTTCCTTGTCTCCTCATGTCCGAAATATTACCTGGCAAGATCAGGGCCAAGGCTATGGCAATTTGCTTGGCTGTGCATTGGGTGATAAACTTCTTTGTCGGTCTATTCTTTTTGCGTTTGCTGGAACAAATGGGTGCACAACTCTTGTACAGTATTTTCGGTGCATTTTGTTTGTTGGCTGTAGCTTTTGTGAAGAAATATGTTCTAGAAACAAAAGGGAAGTCACTGCAGGAAATTGAGATTGCACTTCTTGCACTAGAAGCAACCTAA 1443 0.4387 MRGRQRLGSRETITVHDSKDENSASVRVPSAKPCWRRSLRHVLVASLSSFLYGYHVGVVNETLESISIDLGFSGNTLAEGLVVSICLGGAFIGSLFSGWIADGVGRRRSFQLCALPMIIGAIMSATAKSLWGMLLGRLFVGTGMGLGPPVAALYVAEVSPPAVRGTFGGLTQIATCLGLMAALFIGIPAKEIVGWWRICFWASVIPAVILTIFMEICAESPYWLFKRGRTIEAEAEFEKLLGGLHVKPAMGELSKSDRGDESGAVKLSELLFGCHARVMFIGSALFALQQLSGINAVFYFSSAVFESFGVPSKMGNTCVGICNLFGSVVSMILMDKLGRKVLLLGSFLGMAVTMGLQVIAASSYASGFGAMYISVGGMLLYVLSFALGAGPVPCLLMSEILPGKIRAKAMAICLAVHWVINFFVGLFFLRLLEQMGAQLLYSIFGAFCLLAVAFVKKYVLETKGKSLQEIEIALLALEAT* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5729 480 CDD MFS_GLUT_like 44 461 - -
Psa7g5729 480 ProSitePatterns Sugar transport proteins signature 1. 330 346 IPR005829 GO:0016021|GO:0022857|GO:0055085
Psa7g5729 480 PRINTS Sugar transporter signature 49 59 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g5729 480 PRINTS Sugar transporter signature 134 153 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g5729 480 PRINTS Sugar transporter signature 289 299 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g5729 480 PRINTS Sugar transporter signature 375 396 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g5729 480 PRINTS Sugar transporter signature 398 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g5729 480 SUPERFAMILY MFS general substrate transporter 27 471 IPR036259 -
Psa7g5729 480 Pfam Sugar (and other) transporter 42 472 IPR005828 GO:0016021|GO:0022857|GO:0055085
Psa7g5729 480 ProSitePatterns Sugar transport proteins signature 1. 97 114 IPR005829 GO:0016021|GO:0022857|GO:0055085
Psa7g5729 480 Gene3D MFS general substrate transporter like domains 35 474 IPR036259 -
Psa7g5729 480 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 463 IPR020846 GO:0022857
Psa7g5729 480 TIGRFAM SP: MFS transporter, sugar porter (SP) family 41 470 IPR003663 GO:0016020|GO:0022857|GO:0055085
Psa7g5729 480 PANTHER PLASTIDIC GLUCOSE TRANSPORTER 3-RELATED 6 477 - -
Psa7g5729 480 PANTHER - 6 477 IPR045263 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5729 Psa-Chr7 481634349 481641589 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5729 5 419 Organic Solute Cotransporters AT1G67300 66.351 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5729 - - aprc:113857086 815.453