Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5689 ATGGGATTCTTTCCTCTTTTCCAACCAATTTCCAAATGTAGCACAAAAGATAGATCAAACCAAACCGTCGCATCCGACTTAGACGGCACGCTTCTCGTGTCGCGGAGCGCTTTTCCCTACTACATGCTCATCGCACTCGAGGCGGGAAGCATTCTAAGAGCATTACTTCTCTTATCCTTAGTCCCGTTCATATACTTCACGTACCTATTTGTCTCCGAGACACTGGCGATCAAAACATTGATCTTTGTCACATTTGCGGGACTAAGGATAAGAGACGTGGAGATTGTTTCTCGGTCGGTTTTGCCTAGGTTTTACGCCGAGGACGTGCATCCGGTGACATGGAACGTGTTCAATTCGTTCGGGAAACGGTATGTTGTTACCGCGAGTCCGAGGATTATGGTTGAGCCTTTTGTTAAGACGTTTTTGGGAGTTGATAAGGTGCTTGGAACTGAATTGATGGTTACAAAAAGAGGGAGAGCAACAGGGTTTGTTATGGAACCTGGAGTTCTTGTTGGTGAACACAAGAAAGAGGCAGTTATGAAAGAATTTGGAAGTAACAACTTGCCTGATTTGGGACTTGGAGACAGTGTAACTGACTCTGACTTCATGTCACTTTGCAAGGAAGGTTACATGGTGCCAAGGACCAAATGTGACGCATTACCAAGAAACAAGCTTCTAAGCCCAATAATTTTTCATGAGGGTAGATTAGTCCAAAAACCAACCCCTCTAGTTGCACTCTTAACCTTCCTATGGATGCCAATTGGGATCATACTTTCAATCTTAAGGGTCTATCTCAACATACCTTTGCCTGAAAGAATTGCTTGGTACAATTATAAGTTACTTGGAATAAGAGTAATTAGAAAAGGTACACCTCCACCACCACCAAAAAATGGACAAAGTGGTGTACTATTTATTTGCAACCATAGAACAGTTTTGGATCCGGTTGTCACAGCTGTTGCATTAGGAAGAAAAATAAGTTGTGTAACTTATAGTATAAGTAAGTTCACCGAGATAATTTCACCTATAAAAGCTGTCGCACTCACTAGGGAAAGAGATAGAGACGCTGCAAATATAAAGAAGTTGCTTGAAGAAGGTGATTTAGTAATTTGTCCTGAAGGAACGACTTGTAGGGAGCCGTTTCTATTGAGGTTTAGTGCTCTTTTTGCTGAGCTAACAGATAGGATTGTCCCGGTCGCGATCAATACGAAACAAAGTATGTTTTATGGAACTTCAGTTCGGGGACACAAATTGTTGGATCCTTATTTTGTGTTCATGAACCCTATGCCGACTTATGAGATCACTTTCTTGAACCAATTGCCTTTGGAGTTGACTTGCAATGGAGGGAAATCTTCAATTGAAGTTGCAAATTATATCCAAAGGGTTCTTGGAGGGACTCTTGGATTTGAATGTACCAATCTAACAAGGAAGGATAAGTATGCTATGCTTGCAGGAACAGACGGAATCGTTGGATCAAAGAAGAAAGATTAA 1488 0.416 MGFFPLFQPISKCSTKDRSNQTVASDLDGTLLVSRSAFPYYMLIALEAGSILRALLLLSLVPFIYFTYLFVSETLAIKTLIFVTFAGLRIRDVEIVSRSVLPRFYAEDVHPVTWNVFNSFGKRYVVTASPRIMVEPFVKTFLGVDKVLGTELMVTKRGRATGFVMEPGVLVGEHKKEAVMKEFGSNNLPDLGLGDSVTDSDFMSLCKEGYMVPRTKCDALPRNKLLSPIIFHEGRLVQKPTPLVALLTFLWMPIGIILSILRVYLNIPLPERIAWYNYKLLGIRVIRKGTPPPPPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALTRERDRDAANIKKLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSMFYGTSVRGHKLLDPYFVFMNPMPTYEITFLNQLPLELTCNGGKSSIEVANYIQRVLGGTLGFECTNLTRKDKYAMLAGTDGIVGSKKKD* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5689 495 SMART plsc_2 302 403 IPR002123 GO:0016746
Psa7g5689 495 Gene3D - 121 223 IPR023214 -
Psa7g5689 495 CDD LPLAT 281 462 - -
Psa7g5689 495 Pfam haloacid dehalogenase-like hydrolase 23 202 - -
Psa7g5689 495 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 4 494 - -
Psa7g5689 495 PANTHER ANCIENT UBIQUITOUS PROTEIN 4 494 - -
Psa7g5689 495 SUPERFAMILY HAD-like 6 209 IPR036412 -
Psa7g5689 495 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 216 489 - -
Psa7g5689 495 Pfam Acyltransferase 299 391 IPR002123 GO:0016746
Psa7g5689 495 Coils Coil 344 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5689 Psa-Chr7 480335776 480340221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5689 7 494 Acyl Lipid Metabolism Gene Families AT2G38110 80.000 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5689 K13508 - gmx:100795122 847.04