Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5682 ATGGGTTATTCTTGGATTCGAACGATGCTTCTCATTTCTTGCATTCTTCCAGCTTTGGTCGAGTGCAAAGTTAGACACTACAAATTTCATGTGGTGGCCAAAAATACAACTAGATTATGTTCAAGCAAATCAATTATAACTGTTAATGGGAAATTTCCAGGACCCACTCTTTATGCAAGAGAAGATGATACTGTTCTAGTGAGAGTTGTTAATCAAGTCAACCACAATATTACCATCCATTGGCATGGTATTAGGCAGTTGACAACAGGTTGGGCTGATGGACCAGCATATGTGACACAATGTCCAATTCAATCGGGACATAGCTATGTCTACAACTTCACCATTACTGGTCAAAGAGGAACACTTCTTTGGCATGCACATGTTAATTGGCTAAGATCAACTGTTCATGGTGCCATTGTTATTTTGCCAAAGAAAGGTGTCCCTTATCCTTTCCCAAAGCCAGATGATGAACTCGTTTTGATACTAGGAGAGTGGTGGAAATCTGATACTGAAGCTATCATCAATGAAGCTCTAAAATCAGGATTGGCACCAAATGTCTCAGATTCTCATACTATTAATGGACTTCCTGGAAAAGTTGCCAATTGTTCTACACAAGATGTATACAACCTACCTGTTGAGAGTGGCAAAACCTACCTACTAAGAATCATCAATGCTGCACTCAATGAAGAACTTTTCTTCAAAATAGCAGGCCACAAACTCACTGTTGTAGAAGTTGATGCAACATACACAAAACCATTCGCAATCGAAACAATCGTCATCGCGCCCGGCCAAACAACAAATGTACTACTAAACGCAAACCAAAAATCCGGCAAATATTTAGTCGCAGCTTCGCCTTTCATGGACGCGCCAATCACCGTCGATAACGTAACAGCCACAGCAACTTTGCATTACTCAGGAACTACTCTTGCAAACACTCCAACTTTTCTCACTACACCCCCTCCTAAAAACGCTACTCAAATCGCTAACAACTTCTTAAGCGCGTTAAAAGGACTTAATTCGAAGAAATACCCGGTTAACGTGCCGTTGAAAATCGATCATTCGCTCTTTTTCACGGTCGGATTAGGTATTAAACCTTGTAATTCATGTGTTGCTGGAAATGGTAGCAGAGTTGTAGCTGCTATTAACAATGTGACATTTGTTATGCCAACTACAGCTTTACTACAAGCACATTACTTCAATGTTAAAAACGTTTTTACCACGGATTTTCCTGCGAATCCGCCGCATGTTTTTAACTTCACCGGAGCCGGACCTAAGAACTTGAACACTGACAGTGGTACTAAGGTTTATAGGCTATCATTTAATGATACAGTTCAGCTTGTTATGCAAGATACCGGAATCATTGCGCCTGAGAATCATCCTGTTCATCTTCATGGCTTCAATTTCTTTGTTGTTGGTAGAGGAGTTGGAAATTATAATAGTCAAGTTGATTCGAAGAATTTTAACCTTGTTGATCCTGTTGAAAGGAACACAATTGGTGTGCCTGCTGGTGGTTGGGTTGCGATTAGATTCCGAGCCGATAATCCAGGAGTTTGGTTCATGCATTGCCATTTGGAGGTGCATACAACATGGGGTCTAAAGATGGCATTTTTGGTGGACAATGGAAAAGGACCTAAGCAATCAGTGATACCACCACCAAAAGATCTACCAAAATGTTGA 1677 0.4067 MGYSWIRTMLLISCILPALVECKVRHYKFHVVAKNTTRLCSSKSIITVNGKFPGPTLYAREDDTVLVRVVNQVNHNITIHWHGIRQLTTGWADGPAYVTQCPIQSGHSYVYNFTITGQRGTLLWHAHVNWLRSTVHGAIVILPKKGVPYPFPKPDDELVLILGEWWKSDTEAIINEALKSGLAPNVSDSHTINGLPGKVANCSTQDVYNLPVESGKTYLLRIINAALNEELFFKIAGHKLTVVEVDATYTKPFAIETIVIAPGQTTNVLLNANQKSGKYLVAASPFMDAPITVDNVTATATLHYSGTTLANTPTFLTTPPPKNATQIANNFLSALKGLNSKKYPVNVPLKIDHSLFFTVGLGIKPCNSCVAGNGSRVVAAINNVTFVMPTTALLQAHYFNVKNVFTTDFPANPPHVFNFTGAGPKNLNTDSGTKVYRLSFNDTVQLVMQDTGIIAPENHPVHLHGFNFFVVGRGVGNYNSQVDSKNFNLVDPVERNTIGVPAGGWVAIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGPKQSVIPPPKDLPKC* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5682 558 Gene3D - 367 558 IPR008972 -
Psa7g5682 558 SUPERFAMILY Cupredoxins 348 558 IPR008972 -
Psa7g5682 558 PANTHER MULTI-COPPER OXIDASE 5 558 IPR045087 -
Psa7g5682 558 ProSitePatterns Multicopper oxidases signature 2. 521 532 IPR002355 GO:0005507
Psa7g5682 558 CDD CuRO_2_LCC_plant 159 304 IPR034285 -
Psa7g5682 558 TIGRFAM laccase: laccase 22 558 IPR017761 GO:0046274|GO:0048046|GO:0052716
Psa7g5682 558 SUPERFAMILY Cupredoxins 18 168 IPR008972 -
Psa7g5682 558 CDD CuRO_1_LCC_plant 27 143 IPR034288 GO:0005507
Psa7g5682 558 Pfam Multicopper oxidase 409 541 IPR011706 GO:0005507|GO:0016491
Psa7g5682 558 ProSitePatterns Multicopper oxidases signature 1. 516 536 IPR033138 -
Psa7g5682 558 Gene3D - 18 143 IPR008972 -
Psa7g5682 558 SUPERFAMILY Cupredoxins 151 321 IPR008972 -
Psa7g5682 558 Gene3D - 154 340 IPR008972 -
Psa7g5682 558 PANTHER LACCASE 5 558 - -
Psa7g5682 558 Pfam Multicopper oxidase 157 306 IPR001117 -
Psa7g5682 558 CDD CuRO_3_LCC_plant 404 541 IPR034289 GO:0005507
Psa7g5682 558 Pfam Multicopper oxidase 33 145 IPR011707 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5682 Psa-Chr7 479948167 479952128 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5682 K05909 - gmx:100779825 1020.76