Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5627 ATGACAGACACAAACACCAAAACCGCCGCCACGTGGCGCAATATCCCGAACCTCCTCAACTCCTCTTCTCACGACGTCGTTACACCCAACCACCTCTTCAACGACGCCGTTTTCAGTTTCACCGGCGGAAATGCCGTTCGTCCTAAATTCGCCAGCGTCTCCGCGTCGCAAACCAAACCTGGCAAGGAATTCAGGCCGACGGTGGCTCAGCTTCTAAAACACCCGCTCGCCGTTGTCGCTCTTGTTCCCAAAGATGCCGCTCTGTTTCTTGCCGGAGCTGTTGCTGGTGCGGCTGCTAGGACCCTAACTGCTCCACTTGATCGTATCAAGCTTCTCATGCAGACTCATGGAGTGAGAATAGGTCAAGAAAGTGCGAAGAAGACAATTGGTTTTATTGAGGCAATAACAATGATAGGGAATGAAGAAGGCATTAGAGGTTACTGGAAGGGTAACCTACCTCAGGTTATTAGGGTTATACCTTATAGTGCAGTCCAGCTCTTTGCTTATGAAATTTATAAGAAAATATTCCAGGGAAAAAATGGTGAGCTCTCTGTTGTGGGAAGACTTGCAGCTGGTGCTTTTGCGGGCATGACATCAACTTTTATAACTTATCCATTAGATGTCCTGAGATTACGATTAGCTGTTGAACCTGGGCGTCGAACAATGACAGAGGTCGCCTTGAGCATGGTAAGAGAGGAAGGTTTTGCATCTTTCTACTATGGCCTTGGGCCTTCTCTTATTGGAATAGCTCCATATATTGCAGTTAACTTTTGTGTTTTTGACTTACTAAAGAAGTCGTTGCCGGAGAAATATCAAAAGAGAACTGAAGCATCTCTAATCACCGCCGTGCTTTCAGCATCTCTTGCCACACTTACATGCTATCCTCTGGACACAGTTCGAAGACAGATGCAACTGAAGGGTACACCTTATAAGACAGTATTAGATGCCATTTCAGGTATTGTGGCACGGGATGGAGTTATTGGCTTGTATCGCGGATTCGTGCCTAATGTCTTAAAGAACCTACCGAACAGCAGCATCAGGCTTACCACATATGACATTGTCAAACGATTGATTGCAGCTAGTGAGAAAGAATTTCAAATGATTGCAGAGGAAAACCACAACAAATTAACGAAACATCCATAG 1143 0.4567 MTDTNTKTAATWRNIPNLLNSSSHDVVTPNHLFNDAVFSFTGGNAVRPKFASVSASQTKPGKEFRPTVAQLLKHPLAVVALVPKDAALFLAGAVAGAAARTLTAPLDRIKLLMQTHGVRIGQESAKKTIGFIEAITMIGNEEGIRGYWKGNLPQVIRVIPYSAVQLFAYEIYKKIFQGKNGELSVVGRLAAGAFAGMTSTFITYPLDVLRLRLAVEPGRRTMTEVALSMVREEGFASFYYGLGPSLIGIAPYIAVNFCVFDLLKKSLPEKYQKRTEASLITAVLSASLATLTCYPLDTVRRQMQLKGTPYKTVLDAISGIVARDGVIGLYRGFVPNVLKNLPNSSIRLTTYDIVKRLIAASEKEFQMIAEENHNKLTKHP* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5627 380 Gene3D Mitochondrial carrier domain 85 358 IPR023395 -
Psa7g5627 380 PANTHER ADP/ATP CARRIER PROTEIN 8 370 - -
Psa7g5627 380 Pfam Mitochondrial carrier protein 182 269 IPR018108 -
Psa7g5627 380 Pfam Mitochondrial carrier protein 277 359 IPR018108 -
Psa7g5627 380 Pfam Mitochondrial carrier protein 88 179 IPR018108 -
Psa7g5627 380 PANTHER SOLUTE CARRIER FAMILY 25 8 370 - -
Psa7g5627 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 183 266 IPR018108 -
Psa7g5627 380 PRINTS Mitochondrial carrier protein signature 88 101 IPR002067 GO:0055085
Psa7g5627 380 PRINTS Mitochondrial carrier protein signature 101 115 IPR002067 GO:0055085
Psa7g5627 380 PRINTS Mitochondrial carrier protein signature 150 170 IPR002067 GO:0055085
Psa7g5627 380 PRINTS Mitochondrial carrier protein signature 198 216 IPR002067 GO:0055085
Psa7g5627 380 PRINTS Mitochondrial carrier protein signature 239 257 IPR002067 GO:0055085
Psa7g5627 380 PRINTS Mitochondrial carrier protein signature 282 304 IPR002067 GO:0055085
Psa7g5627 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 357 IPR018108 -
Psa7g5627 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 83 175 IPR018108 -
Psa7g5627 380 SUPERFAMILY Mitochondrial carrier 86 353 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5627 Psa-Chr7 478388422 478392888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5627 49 375 Organic Solute Cotransporters AT3G51870 73.394 4.36e-178 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5627 K14684 - gmx:100796878 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5627 7 478388422 478392888 Psa7g5627 7 478388422 478392888 ECH