Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5617 ATGGTTGGGAAAGCCATGGCCGCGACTTCGCGTGAAAAGCTCGCAAGTCTCATCCACTCAGCCAAATTGGCCATTGATATACCTTCAAAGCTCGACTCATTGCGCAAATTGAAGACTGAACTTCCTCAAGAAGATCCTGTCATTCTTACTGAGTTCCTCCCTCAGCTTTTCGAGTTCCTCTCAGATTGTTTCAGTCCTGTTCGCAAATTTGTCACCGAGATGATTGGTGAAATTGGATTGATGAACACTGAATTCTTGCCTGAAATTGTGCCTGTGTTGATTGATGTCTTGGATGATGATACACCCGCAGTTGTTCGCCAAGCTATACTGTGTGGAATTGATTTGTTTCGTTACACACTTGAGAAAATCGCGGTTCAGGGTCTATATTCCAGTGATTTAGACAGCGCAGTTGAATCTGCATGGGACTGGATGATTAAATTCAAAGACAAAGTATACTCAATAGCATTTCAAAATGGAAGGGGGGGAGCAAAGCTGCTGGCATTGAAGTTTGTTGAAGCAGTTATTCATCTTTACACACTTGATCCTAATGGTTCCACAGAACCCACTTCTCATCATGGAAAACAACCGGTATTTAATATCTCATGGCTGAGGCGGGATCATCCTGTACTTAACATTGGAGATTTGTCAATGGAAGCTAGTCATAATTTGGGTCTCTTGCTTGATCAACTTAGGTTTCCAACTGTGAAGTCTCTTAGTAACTCAGTAATCATTGTGCTGATTAAAAGCCTTTCAGCAATTGCTATAGACAGGCCTGCATTCTATGGTCGCATCTTGCCAGTTTTGCTCAGTTTGGAACCCTCAAGCTCTGTTGTTAATGGGGTCTGTGTGTCTGCGGCACATCATGCTCTAAAGAAGGCCTTTCTTACGTGCACGAAATGTACACATCCAAGTGCTGCCCCGTGGAGAGAACGTTTGGCAGGTGCCTTGAAGGAGATGCAGTCTGAAGGGAAGGCAGATCAGGTGTTCCAGCCAATCTCTGCAAGTAATGGAAGTATATTACCAAGAGAGGATTATCAACCAGTTATCAAGGAAGAGGATGCTGCAGTGAGTTTGTTTGATTCAGGGCACATCAATTTAGGAAGAAAACGACCAGGATCACCAAATGGAGGTGATTTAGCTGAAGATGCAGATGTTCCTGGAAAGCGTGTTAGAACAGCAACTGATGGTTTACAAAATAAACTTAAAATGGAATTAGATGAAGGTACTGCTAACACACAGGATGACACTCCTTCCACTGCACCAGCATCGTCAAAAGGAGATGCGGATAATGGGCCTGTACAGCAGCTTGTTGCCATGTTTGGTGCTTTGGTTGCTCAAGGTGAAAAGGCTGTTGCATCTTTGGAAATTCTTATCTCAAGTATTTCTGCTGACTTACTAGCTGAGGTGGTGATGGCAAATATGCGATATCTACCTCCAAATTGCCCTAATGCTGAAGGAAATGATGAACAGTTGCATGACATTAGTATATTTGGTTCCCATGACAAGGCTAAATATCCACAATCATTTGTGGCTGGTGTTATGTCACTTTCTAGTACTTTCCCCCCTGTTGCTTCACTTCTTGATGCTCATCAATCAGTGTCCAATGTTCATCAATCAGGGTCCAATGTTCATCAATCAGGGTCCAATGTTCATCAGTCAGTGTCCAATGATTTAGTGAAGTCTCACGGGGAGGATGAAATTTCTTCAACTGGAGTAGATAGTAGTGTTATACACTCTGGCATGATTCTTTCATCTCAAAATGCACCATCACCTACTGATTTTCCATCTTCTGATGCTTGTATACCTGGAGTGGAGAATGTCAGCACAACTCTGCCTTGTGACATAGATGACATTGGCAACTTAGAGAGTGGAATCCCTGGCCTAGATTCTTTTGGTCGAAATGATGCATTGTCAGAAACTTTGGCTGCTTCCTCATTGGTGTCCACTGATATGCAAATAGAAGATGCCAGTCAAGAGCAAGTTACGAGTTTGGATAATAGCTCACCCTTGAGCTTAGTTCCATCAATATCCGCAGATAAATCTGAGGAGCTGAGCCCAAAAGCAGTTGCTACAGATGTCAATAGTTTGGTGTCCTCAACAGCTACTTCAGTTGTGTTGCCTTCTCGTCTAGTATTGCCAAAGATGATTGCTCCAGTTGTTGATCTTGCAGATGAACAGAAGGATCATTTGCAAATATCATGTTTTATGCGTATCATTGATGCATATAAGCAAATATCTGTAGCTGGAGGCTCAAAAGTTCGATTTTCAATACTTGCTTATTTAGGAGTTGAGTTTCCTTTGGAGTTAGACCCGTGGAAATTGTTACAAAAGCATATTTTGATTGATTACTCTAGTCATGAGGGACATGAGTTGACATTGCGTGTCCTCTACAGGTTATTTGGTGAGGCTGAAGTGGAGCCTGACTTCTTTTCTTCCACAACTGCAGCTTCTGTATACGAAACATTCCTCCTAACAGTGGCAGAAGCACTTAGAGATTCTTTTCCACCTTCGGATAAATCATTAAGTAAACTGCTTGGTGAATCTCCTTATTTGCCAAAATCAGTTTTAAAAATTTTAGAGAACATGTGTTCTCCTGGAAATGAGGATAAAGTTGAAAAGGAATCACACACATTGAATGCGGATAGAGTTACTCAAGGTCTAAGTGCTGTATGGAGTTTGATTCTTCTAAGGCCTCCCATTCGAGATACTTGCTTAAAAATTGCTTTACAGAGTGCAGTGCATCACTTGGAAGAAGTGCGCATGAAAGCAATACGTCTGGTAGCAAATAAACTTTATCCTTTATCATCAATTTCTAAGCAAATAGAAGATTTTGCGAAGGAAATGATGTTCTCAGTGATGAGTAGTGATGCTTCTGAAGCTACAGATACGGAAGGGTCCATTGCTGATTCACAAAAGCTTCCAAATGAACCACTATCTTTGAGTGGCAGTACTAAGGATGTCTCAGATAATCGGCAACCAAACACATCTGAGGCCACCTCGCTCCTTTCAGTTTCTGAGGCTCAGAGGGGCATGTCATTGTATTTTGCTTTGTGCACAAAGAAACACTCCCTCTTTCGCGAAATATTTGTCATCTATAGAAACACATCAAAAGCAGCAAAGCAGGCTATTCATCGTCAGATTCCCATACTAGTTCGTACATTGGGTTCATCTTCAGTTCTGCTTGAAATTATATCAGATCCCCCAAATGGAAGTGAGAAACTCCTAATGCAGGTGTTGCATACACTTACTGATGGTACAATCCCTTCCAAGGATTTAATATTTACTGTGAAAAGGTTACATGATTCAAAACTTAAGGATGCAGAGGTTCTTATTCCAATATTGCCATTCCTACCGAAAAAGGAGGTAATGCCGGTTTTTGCCAGCATTGTTAAGATGCCTTTTGAGAAGTTTCAAGAAGCACTTGGTCGCATATTGCAGGGATCATCACAATCTGGTCCGGTGCTTACACCAGCTGAAATATTAATTGCTATTCATGGAATTGATCCTGAAAGAGATGGAATTCCCTTAAAAAAGGTAACTGATGCGTGCAATGCTTGCTTTGAGCAGCGACAAACTTTTACCCAAGAAGTTCTTGCCAAAGTTTTGAATCAATTGGTTGAGCAAATTCCTCTTCCTTTATTGTTCATGCGTACGGTATTACAAGCAATAAGTGCTTTTCCAACACTGGTGGATTTTATTATGGGGATTCTCGCTCGCCTTGTGAAGAAGCAGATATGGAAACAACCCAAACTGTGGGTGGGATTCGTGAAGTGTTTGCAATTGACAAAACCTCAGTCATTTGGTGTTTTGCTTCAGCTACCTCCACCACAATTGGAAGCTGCATTAAATAAAGTTCCTGCACTGAAGGCACCATTGATTGCTCATGCTAGCCAGCCAGATATACAATCTTCACTTCCCAGGTCTGTGCTGGTTGTTCTTGGCATTGTTTTCGATTCTCAGGTTTCAAGTCAGCCAGGCATTGTTTCCGATTCTCAGGCTTCAAGTCAGCCAGGCATTGTTTCCGATTCCCAGGTTTCAAGTCAGCCACAAACTAGCCAAACACAGACAGTCGAGACAAGCAACTCAGATAAAGACACAATGACTGAAAAATCCAAAGATTCGTCTACAGTGAGCTAA 4137 0.4184 MVGKAMAATSREKLASLIHSAKLAIDIPSKLDSLRKLKTELPQEDPVILTEFLPQLFEFLSDCFSPVRKFVTEMIGEIGLMNTEFLPEIVPVLIDVLDDDTPAVVRQAILCGIDLFRYTLEKIAVQGLYSSDLDSAVESAWDWMIKFKDKVYSIAFQNGRGGAKLLALKFVEAVIHLYTLDPNGSTEPTSHHGKQPVFNISWLRRDHPVLNIGDLSMEASHNLGLLLDQLRFPTVKSLSNSVIIVLIKSLSAIAIDRPAFYGRILPVLLSLEPSSSVVNGVCVSAAHHALKKAFLTCTKCTHPSAAPWRERLAGALKEMQSEGKADQVFQPISASNGSILPREDYQPVIKEEDAAVSLFDSGHINLGRKRPGSPNGGDLAEDADVPGKRVRTATDGLQNKLKMELDEGTANTQDDTPSTAPASSKGDADNGPVQQLVAMFGALVAQGEKAVASLEILISSISADLLAEVVMANMRYLPPNCPNAEGNDEQLHDISIFGSHDKAKYPQSFVAGVMSLSSTFPPVASLLDAHQSVSNVHQSGSNVHQSGSNVHQSVSNDLVKSHGEDEISSTGVDSSVIHSGMILSSQNAPSPTDFPSSDACIPGVENVSTTLPCDIDDIGNLESGIPGLDSFGRNDALSETLAASSLVSTDMQIEDASQEQVTSLDNSSPLSLVPSISADKSEELSPKAVATDVNSLVSSTATSVVLPSRLVLPKMIAPVVDLADEQKDHLQISCFMRIIDAYKQISVAGGSKVRFSILAYLGVEFPLELDPWKLLQKHILIDYSSHEGHELTLRVLYRLFGEAEVEPDFFSSTTAASVYETFLLTVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKILENMCSPGNEDKVEKESHTLNADRVTQGLSAVWSLILLRPPIRDTCLKIALQSAVHHLEEVRMKAIRLVANKLYPLSSISKQIEDFAKEMMFSVMSSDASEATDTEGSIADSQKLPNEPLSLSGSTKDVSDNRQPNTSEATSLLSVSEAQRGMSLYFALCTKKHSLFREIFVIYRNTSKAAKQAIHRQIPILVRTLGSSSVLLEIISDPPNGSEKLLMQVLHTLTDGTIPSKDLIFTVKRLHDSKLKDAEVLIPILPFLPKKEVMPVFASIVKMPFEKFQEALGRILQGSSQSGPVLTPAEILIAIHGIDPERDGIPLKKVTDACNACFEQRQTFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAISAFPTLVDFIMGILARLVKKQIWKQPKLWVGFVKCLQLTKPQSFGVLLQLPPPQLEAALNKVPALKAPLIAHASQPDIQSSLPRSVLVVLGIVFDSQVSSQPGIVSDSQASSQPGIVSDSQVSSQPQTSQTQTVETSNSDKDTMTEKSKDSSTVS* 1379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5617 1378 PANTHER SYMPLEKIN/PTA1-RELATED 1 1257 - -
Psa7g5617 1378 Pfam Symplekin/PTA1 N-terminal 102 320 IPR032460 -
Psa7g5617 1378 Pfam Symplekin tight junction protein C terminal 1106 1284 IPR022075 -
Psa7g5617 1378 MobiDBLite consensus disorder prediction 410 428 - -
Psa7g5617 1378 MobiDBLite consensus disorder prediction 365 428 - -
Psa7g5617 1378 MobiDBLite consensus disorder prediction 961 1001 - -
Psa7g5617 1378 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1257 - -
Psa7g5617 1378 SUPERFAMILY ARM repeat 46 934 IPR016024 -
Psa7g5617 1378 Gene3D - 2 336 IPR011989 -
Psa7g5617 1378 MobiDBLite consensus disorder prediction 1327 1378 - -
Psa7g5617 1378 MobiDBLite consensus disorder prediction 1327 1362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5617 Psa-Chr7 478176095 478197554 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5617 K06100 - gmx:100779360 2006.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5617 7 478176095 478197554 Psa7g5617 7 478176095 478197554 ECH