Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5589 ATGTGGAATGAAAACACCCCTTGCTGTAATTGGAGTGGTGTAACGTGTGAAAATGAGGGAAATGTTATTGGCCTTGACCTTAGTGAAGAATATATCTATGGTGGATTTGAAAGTGCAAGTAGTATTTTTTATCTCCAATATCTCCAAAAACTGAATTTGGCTTATAACAATTTCAATTCTCCCATTCCATCTGGATTCAGTAAGTTGGTGATGTTGAGTTATCTGAATTTGTCAAATTGTTACAATGTGGGGAATATTCCTATGGAGATTTCAAAGCTTACAAGCATCCCTGATAACTTATGCAATGCTTCGCAATTTCAAGTTCTTGACATTTCCTTCAACAACTTTTCTGGAACAATTCCTCCATGTTTAATCACAATGACTACCCTTGAAGTATTAGATTTGAGAAATAATACTCTCACTGGCCCCATACCAGATATGTTTCCAAATTCTTGGTCTGTAACCCGATTGAACTTCCATGGAAATCAATTACAAGGGCCAATTCCCAGGTCTCTATCCCACTGCTCATCATTGGAGTTATTGGACATTGGATCAAATCAAATGGTTGATCATTTTCCATGCTTCTTAAATGACATACAAACACTTACTGTCTTGGTTATGAGGAACAACAAATTTTATGGATCCATAGAATGTTCGGAAAATAAACCTTGGAAATCGATTAAAATTGTGGACATTGCTTTCAACAACTTCAATGGAAAACTACCTAGAGAGTATTTTACAACCTGGGATAGAATGATATATGATGAATATGTTGCACTTGACATCAACTACATGATGTCACGGTACTACCCATATTATCACGATAGTGTTACAGTTACATCTAAAGGCCAACGACAGGATTTGGTTAAAATTCTAACAATTTTCAAAGCCATTGATTTCTCATCCAATTTTTTTGAAGGACCAATACCCGAGTCTTTGATGGACTTGAAAGCCCTTTATATTTTGAATTTTTCAAACAATGGTCTTTCAGGTGAAATCCCATCTTCGATAGGTAACATGAAACAGTTAGAGTCCTTGGACTTTTCAAATAACTCCTTGGTTGGTGAAATTCCAGTGCAACTATCAACTTTGTCCTTTCTTTCTTATTTGAACCTTTCTTTCAATCATTTTGTGGGGAAAATCCCAACAGGTACACAACTTCAATCATTTTCAGCTTCTTCCTTTGAAGGAAATGATGGACTATATGGTCTTCCATTGAATGAAATACCAGATGGTAAAACCAAGGACTTGCATTCACAACCAGCATGTGAAAGACTAGTTTGCTCAATAGACTGGAACTTTTTAAGTGTTGAATTGGGATTTGTTTTTGGACTCGGAATGATCATTGGTCCTGTCATGTTTTGGAAGAAATGGAGGGTAGGTTATTGGAAACTTGCGGACAAAATTCTCTGCAAAATATTTCCTTGGATGCATCTTGAATATGCAACTGACAGAGGAAAAACATACATTGTTTTAAGGTGGTAG 1485 0.3609 MWNENTPCCNWSGVTCENEGNVIGLDLSEEYIYGGFESASSIFYLQYLQKLNLAYNNFNSPIPSGFSKLVMLSYLNLSNCYNVGNIPMEISKLTSIPDNLCNASQFQVLDISFNNFSGTIPPCLITMTTLEVLDLRNNTLTGPIPDMFPNSWSVTRLNFHGNQLQGPIPRSLSHCSSLELLDIGSNQMVDHFPCFLNDIQTLTVLVMRNNKFYGSIECSENKPWKSIKIVDIAFNNFNGKLPREYFTTWDRMIYDEYVALDINYMMSRYYPYYHDSVTVTSKGQRQDLVKILTIFKAIDFSSNFFEGPIPESLMDLKALYILNFSNNGLSGEIPSSIGNMKQLESLDFSNNSLVGEIPVQLSTLSFLSYLNLSFNHFVGKIPTGTQLQSFSASSFEGNDGLYGLPLNEIPDGKTKDLHSQPACERLVCSIDWNFLSVELGFVFGLGMIIGPVMFWKKWRVGYWKLADKILCKIFPWMHLEYATDRGKTYIVLRW* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5589 494 SUPERFAMILY L domain-like 5 406 - -
Psa7g5589 494 Pfam Leucine rich repeat 129 187 IPR001611 GO:0005515
Psa7g5589 494 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 1 94 - -
Psa7g5589 494 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 95 479 - -
Psa7g5589 494 Gene3D Ribonuclease Inhibitor 1 94 IPR032675 -
Psa7g5589 494 PANTHER DISEASE RESISTANCE FAMILY PROTEIN/LRR PROTEIN 1 94 - -
Psa7g5589 494 PANTHER DISEASE RESISTANCE FAMILY PROTEIN/LRR PROTEIN 95 479 - -
Psa7g5589 494 Gene3D Ribonuclease Inhibitor 95 412 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5589 Psa-Chr7 476798317 476799889 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5589 96 459 Receptor kinase-like Gene Family AT3G05660 43.085 3.65e-83 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5589 - - mtr:MTR_4g019010 533.487