Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5543 ATGGCATCATTCACCACTACCCATTACTTCAAATCCTTCATTTTCATCACTTTATTCATAAAAATCCTATCTTTTGACCCAATTCCATTGTTTTCCTTTGTTGATTTTGAAAAAGATCTGAAATTTAAGTCTAATGTTGCTTTTTTTGGTAATGCAAAGGTTGTCAATGGTGAGTCCAAGATTCAACTCTCTGGTTCAGGTAGTTTTGGTGCTGAGTCTGGGAGAGTCATTTACAACAAACCCATCAAGCTTTTTCAAGGTAAACCTAAGCAATTAGTTTCATTTTCAACTTACTTTACATTTTCAATCTCATTGGAAAGTGGGGGTGGTTTAGCTTTTGTTATAATTCCAAATGGTGTTAAAGGTGATGTTTTTAATCAAACTTCATCTGGGTTTTCTCTTGGATTGAAAAATAAAGATTTTGAAGTTATTGGTGTTGAGTTTAGTGCTTCAAGGGATGGTAAAAATGAGATTTTGATTAGAAATGGTGATTCAAGTAAAATCTACTTTACCAATTTGGCACTATCAAGTGGTGAAAAGATGCATACTTGGATTGATTATGAAGCAAGTTCAATGAGATTAGAAGTGAGGTTGAGTAAAAATGGGAATTTAAAGCCATTTGATCCATTGTTATGGGACAAAATTGAAGTATCTAACGTGTTGAAGGAGGAAGAAATGTTTGTAGGTTTTAGTCCTGTGAGAGAGACTAATGCTTTTTTGTACTCATGGAGCTTTGTCATGAGACATTTTCCACCACATTCTATGCATTCAGAGCCACTTGATCCTAAGGTTTTTGTGAAAAACAGTGAGAATCCAATGGTTGTTGAATCAAAGGAAAAGGGAAAGAGTGATTGTTTTTTAAGAGTTCTTGCTGCAATGATATTTGGTACTGGTTGTGGAGCTTTGACAGCATTCACTGTGCTTTATTTGTGGACAATCTTTGGCAATAAACGCGGTGGCGCAGTGGTTCCAGAAGGATGTGTTATGCAAGCTTTGGAGGGTGATTATAGAAAAGTTAAGATTGTTGTAGATAATAAAACCATTGGAGATGGTAATAAGTAA 1062 0.3503 MASFTTTHYFKSFIFITLFIKILSFDPIPLFSFVDFEKDLKFKSNVAFFGNAKVVNGESKIQLSGSGSFGAESGRVIYNKPIKLFQGKPKQLVSFSTYFTFSISLESGGGLAFVIIPNGVKGDVFNQTSSGFSLGLKNKDFEVIGVEFSASRDGKNEILIRNGDSSKIYFTNLALSSGEKMHTWIDYEASSMRLEVRLSKNGNLKPFDPLLWDKIEVSNVLKEEEMFVGFSPVRETNAFLYSWSFVMRHFPPHSMHSEPLDPKVFVKNSENPMVVESKEKGKSDCFLRVLAAMIFGTGCGALTAFTVLYLWTIFGNKRGGAVVPEGCVMQALEGDYRKVKIVVDNKTIGDGNK* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5543 353 Gene3D - 30 249 - -
Psa7g5543 353 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 256 IPR013320 -
Psa7g5543 353 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 1 353 - -
Psa7g5543 353 Pfam Legume lectin domain 31 252 IPR001220 GO:0030246
Psa7g5543 353 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 1 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5543 Psa-Chr7 474573616 474575425 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5543 31 245 Receptor kinase-like Gene Family AT2G29250 31.174 1.42e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5543 - - ccaj:109799551 412.149