Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5507 ATGTATTGGCTTAAACGCACATTTTCCAAGAGTTTCACAAATCCAAACACTTCAACAGAATCCAATTCCACACAACAATCACAAGAACATGAACATCATGGGATTACCGACGAACTCATAAACCTCGTCAAATCATTCACCATTGACACCTTCAAAAATTTCCCTCTCAAAGATGAAGATGAATCCAGTTATAGTGAGGAAGTACAATCTGATTCAACAAGAGTTCGAAAGGATCTTTCTCAGTGGCAAGAGAGGCATGCAGTTCTCATACTCTCAAGAGTAAAGGAAATGTCGCAACTGAGATATGTACTGTGTCCACGCCATTTGAAGGACAATCAATTCTGGACAATATACTTTGCACTTGCCAGGAGCCATCTTGCCCCATATGAGCTACTTGCCATACAACAAGAGAAACTCAAACAGATGGCAATGGAAGAAGATAAATCTTCAGAAAACCACCCGTACGAAATTGAAATGGCAGAAGCAAAGCACGGGAACTCCGTAGAGCCTTTAGCACCCCCGTAG 525 0.4152 MYWLKRTFSKSFTNPNTSTESNSTQQSQEHEHHGITDELINLVKSFTIDTFKNFPLKDEDESSYSEEVQSDSTRVRKDLSQWQERHAVLILSRVKEMSQLRYVLCPRHLKDNQFWTIYFALARSHLAPYELLAIQQEKLKQMAMEEDKSSENHPYEIEMAEAKHGNSVEPLAPP* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5507 174 Pfam BSD domain 80 126 IPR005607 -
Psa7g5507 174 PANTHER OS04G0662000 PROTEIN 2 170 - -
Psa7g5507 174 PANTHER BSD DOMAIN-CONTAINING PROTEIN 2 170 - -
Psa7g5507 174 Gene3D BSD domain 30 131 IPR035925 -
Psa7g5507 174 SMART wurzfinal6 74 126 IPR005607 -
Psa7g5507 174 SUPERFAMILY BSD domain-like 34 129 IPR035925 -
Psa7g5507 174 ProSiteProfiles BSD domain profile. 69 126 IPR005607 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5507 34 154 EF-hand Containing Proteins AT1G69030 47.107 1.25e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5507 - - gmx:100805729 224.942