Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5448 ATGGCCACAGCTATCAAATTTTTTCAGTTGAACACTGGTGCTAGAATTCCTTCCGTTGGATTAGGAACTTGGCAAGCTGAACCTGGTGTTGTAGCGAAAGCTATCACCACTGCTATTCAGGTTGGATATAGGCATATTGATTGTGCTCAAGCTTATAAGAATCAAGCTGAGATTGGTTCTGCACTGAAAAAACTCTTTGAGGATGGTGTTGTTAAGCGCGAGGAGTTATGGATCACTTCAAAACTATGGTGTTCAGATCATCATCCAGAAGATGTGCCAAAAGCATTGGAAAAAACTTTAAAGGATTTGCAACTTGATTACCTTGACCTCTATCTGATCCACTGGCCAGTGAGCATGAAAAGGGGAACAGGTGAATTTAAGCCTGAAAATCTTGATCATCCTGACATACCAAGCACATGGAAAGCAATGGAGGCACTATATGACTCAGGCAAGGCGAAAGCTATTGGAGTGAGCAACTTCTCTACAAAGAAACTTCAAGCTCTATTGGACATAGCAAGAGTGCCCCCTGCTGCTAATCAGGTGGAATTGCACCCTGGATGGCAGCAGTCAAAGTTGCATGCCTTTTGTGCATCAAAAGGAATTCATGTATCTGGATATTCTCCTCTAGGCTCTCCAGGAGTACTCAAAAGTGACATTCTGCAGAATCCAGTTGTCAAAGAGGTTGCAGAGAAATTAGGGAAGACACCGGGACAAGTTGCCCTTCGATGGGGACTACAAGCAGGACATAGTGTTCTACCTAAGAGCACTAATGAGGCTAGAATCAAGGAAAATTTAGACGTGATCGATTGGTCTATTCCTGAAGACCTGATATCTAAGTTCGCTGAAATTAAGCAGGATAAGCTAATTAAGGGTACATTTTTTGCCAACGAGACCTACGGGGCCTATAAGACTGTTGAAGAACTCTGGGACGGTGAAGTATGA 942 0.431 MATAIKFFQLNTGARIPSVGLGTWQAEPGVVAKAITTAIQVGYRHIDCAQAYKNQAEIGSALKKLFEDGVVKREELWITSKLWCSDHHPEDVPKALEKTLKDLQLDYLDLYLIHWPVSMKRGTGEFKPENLDHPDIPSTWKAMEALYDSGKAKAIGVSNFSTKKLQALLDIARVPPAANQVELHPGWQQSKLHAFCASKGIHVSGYSPLGSPGVLKSDILQNPVVKEVAEKLGKTPGQVALRWGLQAGHSVLPKSTNEARIKENLDVIDWSIPEDLISKFAEIKQDKLIKGTFFANETYGAYKTVEELWDGEV* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5448 313 PIRSF AKR 1 307 IPR020471 GO:0016491
Psa7g5448 313 Pfam Aldo/keto reductase family 19 283 IPR023210 -
Psa7g5448 313 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 2 312 - -
Psa7g5448 313 Gene3D - 4 313 IPR036812 -
Psa7g5448 313 ProSitePatterns Aldo/keto reductase family signature 2. 143 160 IPR018170 GO:0016491
Psa7g5448 313 CDD AKR_AKR4C1-15 6 290 IPR044498 GO:0016491
Psa7g5448 313 ProSitePatterns Aldo/keto reductase family putative active site signature. 252 267 IPR018170 GO:0016491
Psa7g5448 313 PRINTS Aldo-keto reductase signature 38 62 IPR020471 GO:0016491
Psa7g5448 313 PRINTS Aldo-keto reductase signature 98 116 IPR020471 GO:0016491
Psa7g5448 313 PRINTS Aldo-keto reductase signature 143 160 IPR020471 GO:0016491
Psa7g5448 313 PRINTS Aldo-keto reductase signature 177 206 IPR020471 GO:0016491
Psa7g5448 313 PRINTS Aldo-keto reductase signature 219 243 IPR020471 GO:0016491
Psa7g5448 313 ProSitePatterns Aldo/keto reductase family signature 1. 42 59 IPR018170 GO:0016491
Psa7g5448 313 SUPERFAMILY NAD(P)-linked oxidoreductase 5 286 IPR036812 -
Psa7g5448 313 PANTHER ALDO/KETO REDUCTASE 2 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5448 Psa-Chr7 468732328 468736201 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5448 K00002 - gmx:100801791 538.495