Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5425 ATGGACCGTACTTCTTCTGACAAACAACATCAGCAGTTGTCTTTGGGGAAGAATGGCAGACAGAGATACAATGAATGGATTTTTCGCGATGTTCCGAGTGATATAACTATAGAAGTTTGTGGAGTAACATTTTCATTACACAAGTTTCCTCTTGTTTCTCGAAGTGGTAGAATTCGAAGATTAGTTGCAGAACACCGAGATTCTGATATCTCAAGAGTTGAGCTTCTTAATCTACCAGGAGGAGCTGAATGCTTTGAATTGGCTGCCAAATTCTGTTATGGTATTAACTTCGAGATCACATCCACAAATGTTGCACAGCTTTGTTGCGTTTCGGATTACCTCGAAATGACCGATGATTTCTCAAAAGATAATCTCGGTTCGAGAGCTGAGGAATATCTCAATTGTATTGTCTGCAAGAATCTTGAAATGTGTGTTGAAGTCTTGCAACAATGCGAAAGTTTGATTCCTCTCGCAGACGAGCTGAAAATAGTTTCGCGTTGCATTGACGCGATAGCTTCGAAAACTTGTGCCGAGCAAATAGCTTCTAGTTTCTCGAGATTAGAGTATAGCAGCTCGGGTAGGTTGCACATGAGCAGGCAAGCCAAATGCGATGGTGATTGGTGGATAGAAGATATTTCGGTTTTAAGGATCGATATGTATCAACGAGTGATAACAGCCATGAAGTGCCGTGGCGTTCGGCCAGAAAGTATCGGTGCTTCCCTTGTGAACTATGCAGAGAAAGAATTGACGAAGAAAACGACCTTGTGGAATCAATCTAGCCAGAATAAAACTGATTCAAATTCAACTTTGCATGAAAAACTCGTGGTTGAGACTATCGTAGGCCTTTTGCCAGTTGAGAAACTTGTCATTCCGATTCATTTCCTTTTCGGGCTTCTGCGAAGCGCGGTGATGCTTGATTGCGCGATTTCCTCTAGACTTGACTTGGAAAGAAGGATTGGATCGCAGTTGGATCAATCAACGCTTGACGATATTTTGATTCCGTCTTTCAAGCATTCGGGTGATACCTTATTTGATGTTGACACAGTTCATAGACTTCTAGTAAACTTCAGTCAGCAGGATGATAGTGACGATGATCTAGAAGATGGTTCTCTTTTCGAATCCGATAGTCCTCGTTCGCCCTCGCAAACTTCGTTAGTTAAGGTGTCGAAATTAGTCGACAACTACCTCGCTGAAATTGCACCTGATGCAAACTTGAAGCTTTCCAAGTTTTTGGTCATTGCAGAAACATTGCCAGCACATGCTCGTACCGTTCATGACGGCTTATATCGAGCCATCGATATTTACTTGAAAGCTCATCAAGGTTTATCAGACTTGGAGAAGAAGAAACTATGCAAATTAATCGATTTTCAAAAGCTTACTCAAGAAGCTGGAGCGCACGCTGCGCAAAACGAGCGCCTTCCTCTACAATCAATAGTGCAAGTTCTATATTTCGAACAACTAAAGCTAAGAAACTCGTTGTCCACGACCAATGGGGACGATGACATCAAGCCAATGCACGCGTCGTGGCGCATAAGTAGTGGTGCACTAAGTGCAGCAATGTCTCCACGCGATAACTACGCATCATTGAGGCGCGAGAATCGTGAGTTAAAACTCGAATTGGCTCGACTACGGATGAGACTAAATGATCTAGAGAGGGAGCATGTTTGCATGAAGAGGGATATGGCGAAATCAGGATCGCGTAAATTTATGAGCTCTTTTTCGAAAAAAATTAGTAGGCTTAGTCTCTTTGGACATAGTTCTTCTAGAGAAACAAGTTCTCCATCTAGAAACTCTCATAGAACAGATTCAAAGGTGATTGAGAGAACTTGTGCTAGCACAGAATAG 1845 0.4233 MDRTSSDKQHQQLSLGKNGRQRYNEWIFRDVPSDITIEVCGVTFSLHKFPLVSRSGRIRRLVAEHRDSDISRVELLNLPGGAECFELAAKFCYGINFEITSTNVAQLCCVSDYLEMTDDFSKDNLGSRAEEYLNCIVCKNLEMCVEVLQQCESLIPLADELKIVSRCIDAIASKTCAEQIASSFSRLEYSSSGRLHMSRQAKCDGDWWIEDISVLRIDMYQRVITAMKCRGVRPESIGASLVNYAEKELTKKTTLWNQSSQNKTDSNSTLHEKLVVETIVGLLPVEKLVIPIHFLFGLLRSAVMLDCAISSRLDLERRIGSQLDQSTLDDILIPSFKHSGDTLFDVDTVHRLLVNFSQQDDSDDDLEDGSLFESDSPRSPSQTSLVKVSKLVDNYLAEIAPDANLKLSKFLVIAETLPAHARTVHDGLYRAIDIYLKAHQGLSDLEKKKLCKLIDFQKLTQEAGAHAAQNERLPLQSIVQVLYFEQLKLRNSLSTTNGDDDIKPMHASWRISSGALSAAMSPRDNYASLRRENRELKLELARLRMRLNDLEREHVCMKRDMAKSGSRKFMSSFSKKISRLSLFGHSSSRETSSPSRNSHRTDSKVIERTCASTE* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5425 614 Gene3D Potassium Channel Kv1.1; Chain A 9 135 IPR011333 -
Psa7g5425 614 Pfam NPH3 family 206 463 IPR027356 -
Psa7g5425 614 Coils Coil 526 560 - -
Psa7g5425 614 MobiDBLite consensus disorder prediction 584 614 - -
Psa7g5425 614 ProSiteProfiles NPH3 domain profile. 206 488 IPR027356 -
Psa7g5425 614 SUPERFAMILY POZ domain 17 118 IPR011333 -
Psa7g5425 614 ProSiteProfiles BTB domain profile. 33 101 IPR000210 GO:0005515
Psa7g5425 614 PANTHER OS12G0117600 PROTEIN 19 601 IPR043454 -
Psa7g5425 614 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 19 601 - -
Psa7g5425 614 Pfam BTB/POZ domain 32 118 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5425 Psa-Chr7 468247509 468250600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5425 24 563 EF-hand Containing Proteins AT3G44820 34.851 1.45e-112 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5425 - - gmx:100799524 1047.34