Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5417 ATGGCGAAACGCAAGAAATCGAAATCCAATTCACAATCGGTTGGTACATCGTCGCAATCGGAGGAAGCAGGAGAAACCGTACGTAATGGGAGGAGTAGCATATCGGAGTATGAGGAACAAAGACTACGGAGAATTGCAGAAAACCAAGCGAGGTTGAAAGCTTTGGGGTTACCTCAAATGGCCTCTTCCTTGAAAACCTTGCCTCAGATTAACAAGAAAAAGGGGAAAGAAAAGGAAAAGGTTGAAGGTGATGATGAAGAGTATAGACCCGAAAATGAAGAGGAACGAGAAACGGAATCAGATTCTTCCAGTGAACATGAGTCTGATTTTGAAAATGCTTCTGGGTCACGGAAAAGGAAGGCGAAGAACAAAAGTTTGAAGGTGAAAAGCAGAGTAGCCGGAAAGAAGCATGGTGGTAATTTAGATAATGTTGACGATGAAGATGAAGCTTTGATGCAGGCAATTGCTCTTTCTCTGCAGAATTCTGCAGAACCTTCAGTTTGCTCTAACATGAATGTAGGGAACATCAGCAAGGCCGAGAAAAAGGAAAACATTCACACTCAAGAAGATAAGGAACAAAAGAAGAACAAAAAATCGTTTATTAGTCGGCTGCAAATGACTGAGGATGAACTCATCGTACACTTCTTCCAGCTTGATGAAGCTGGAAAAGGAACTGTAACAATAAGGGATTTAGAAAGAGCAGCTATAACTCATGATTTTGCATGGACCGATAATGAGTTGGTTGATATGATTCGCTGCTTTGATAGTGACGGAGATGGAAGGTTAAGTTTAGAAGATTTTCGCAAGATTGCTGTTCGTTGCAACATGATAAAAGACTCGCAAAATTCTTGA 852 0.4108 MAKRKKSKSNSQSVGTSSQSEEAGETVRNGRSSISEYEEQRLRRIAENQARLKALGLPQMASSLKTLPQINKKKGKEKEKVEGDDEEYRPENEEERETESDSSSEHESDFENASGSRKRKAKNKSLKVKSRVAGKKHGGNLDNVDDEDEALMQAIALSLQNSAEPSVCSNMNVGNISKAEKKENIHTQEDKEQKKNKKSFISRLQMTEDELIVHFFQLDEAGKGTVTIRDLERAAITHDFAWTDNELVDMIRCFDSDGDGRLSLEDFRKIAVRCNMIKDSQNS* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5417 283 ProSiteProfiles EF-hand calcium-binding domain profile. 242 277 IPR002048 GO:0005509
Psa7g5417 283 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 146 165 IPR003903 -
Psa7g5417 283 MobiDBLite consensus disorder prediction 70 85 - -
Psa7g5417 283 MobiDBLite consensus disorder prediction 95 118 - -
Psa7g5417 283 MobiDBLite consensus disorder prediction 1 37 - -
Psa7g5417 283 MobiDBLite consensus disorder prediction 56 144 - -
Psa7g5417 283 SUPERFAMILY EF-hand 198 270 IPR011992 -
Psa7g5417 283 SMART efh_1 246 274 IPR002048 GO:0005509
Psa7g5417 283 ProSitePatterns EF-hand calcium-binding domain. 255 267 IPR018247 -
Psa7g5417 283 Gene3D - 168 282 - -
Psa7g5417 283 MobiDBLite consensus disorder prediction 7 31 - -
Psa7g5417 283 Pfam EF-hand domain pair 210 270 IPR002048 GO:0005509
Psa7g5417 283 MobiDBLite consensus disorder prediction 119 134 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5417 31 280 EF-hand Containing Proteins AT1G73440 40.000 2.44e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5417 - - pvu:PHAVU_010G072500g 295.434