Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5408 ATGGCGTACGAGGATCGATTCGGACAACAAGTTCAGAGACCAAAATATGATTGTCTTCTTTTTGATTTAGATGATACTTTGTATCCTCTTAGATCTGGTCTCGCAAAATCTTGTCTCCAAAATATTAAAGATTATATGGTTGAAAAGCTTGGAATTGACTCAAGCAAGATTGATGACTTGTCAAACCTACTTTACAAGAACTATGGAACAACTATGTCTGGTTTAAGGGCAATTGGTTATGACTTTGACTATGATGAATATCATAGCTTTGTTCATGGAAGATTACCTTATGAGAACTTAAAACCAGACCCAATCCTGAGGAATCTGTTGCTGAGTCTTCCCTATAGAAAACTTATCTTCACAAATGCAGACAAAGTTCATGCTGTTAAGGCACTAAGTAGACTTGGATTAGAAGATTGTTTTGAAGGAATTATATGTTTTGAAACACTTAATCCAATCCACAAAAGCATTATCTCAGATGATGAAGATGACATTGAATTTGTAGGTTCAACAAGCACTAGTAATAATAGTGCAACAAACATTCAAATCTTTGACATCATAGACCATTTTGCTAAACCAAATCCAAATGTACTTGTCTTGCCAAAGACACCAATTGTTTGCAAACCATCAGAATCCGCCATTGAATTCGCTCTCAAGATCGCCAACCTTAACCCTCAAAGAACCTTGTTCTTTGAGGACAGTGTCCGTAACATACAAGCTGGAAAACGTGTGGGGCTAGACACAGTGTTGGTTGGTACATCACAAAGAGTTAAAGGTGCAGATTATGCATTGGAAAGTATTCACAATCTTAGGGAAGCTGTGCCTGAATTATGGGAAAATGACATAAAATCAGAAGTTGCATACCCTGGAAAGTTAACATCAGTTACAGCTTGA 894 0.3691 MAYEDRFGQQVQRPKYDCLLFDLDDTLYPLRSGLAKSCLQNIKDYMVEKLGIDSSKIDDLSNLLYKNYGTTMSGLRAIGYDFDYDEYHSFVHGRLPYENLKPDPILRNLLLSLPYRKLIFTNADKVHAVKALSRLGLEDCFEGIICFETLNPIHKSIISDDEDDIEFVGSTSTSNNSATNIQIFDIIDHFAKPNPNVLVLPKTPIVCKPSESAIEFALKIANLNPQRTLFFEDSVRNIQAGKRVGLDTVLVGTSQRVKGADYALESIHNLREAVPELWENDIKSEVAYPGKLTSVTA* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5408 297 Pfam HAD-hyrolase-like 208 256 - -
Psa7g5408 297 SUPERFAMILY HAD-like 14 278 IPR036412 -
Psa7g5408 297 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 295 - -
Psa7g5408 297 Gene3D - 82 278 IPR023214 -
Psa7g5408 297 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 203 251 IPR006439 -
Psa7g5408 297 SFLD Haloacid Dehalogenase 12 279 - -
Psa7g5408 297 SFLD C1.5.3: 5'-Nucleotidase Like 12 279 IPR010237 -
Psa7g5408 297 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 1 295 - -
Psa7g5408 297 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 17 251 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5408 Psa-Chr7 466354689 466358137 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5408 K07025 - gmx:100796466 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5408 7 466354689 466358137 Psa7g5408 7 466354689 466358137 ECH