Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5404 ATGCAAACATCATCTTCTCTGCCCTTACCAATCATCAACCATTCTGGTTTTAACGAAATGGAGCGCGAGGACCACTTTGCAAAAAACCAAAAATATGATTGCCTTCTTTTTGATTTAGATGATACTTTGTATCCACTCAGTTCTGGTCTTGCAAATGCAATTCTGAAAAATCTTGAAGCCTACATGGTTGAAAAGCTTGGCATAGAACCAAGTAAAACTGATGACTTATGCAACCTTCTTTACAAGAACTATGGAACAACTCTATCTGGTTTAAGGGCAATTGGTTATGAGTTTGACTATGATGAATATCATAGTTTTATTCATGGGAGATTGCCTTATGAGAACCTGAAACCGGACCCGGTTCTAAGGAACATGTTGAAGAGCCTGCCCTATAGGAAACTCATCTTCACAAATGCAGACAAAGTTCATGCTCTCAAGACACTGAACATACTTGGATTAGAAGACTGCTTTGAAGGAATTATATGCTTCGAGACTCTTAATCCAGTCCACCAGAGTGGTGTCTCTGATGATGAAGATGACATTGAGTTTGGAGGCTTACCAAGTGCTATTAAGCCGATAACTAGTGATAGAGCAAGCAACTCTCAGATCTTTGACATCATAAGCCACTTTGCTCAGGAAAATCCCAGCGGAAACCTGCCAAAGACACCAGTTGTTTGCAAGCCGTCAGAAAAAGCCATTGAACTGGCTCTCAACATAGCCAACATTAACCCACATAAAACTTTGTTCTTTGAAGACAGTGTCCGCAACATTCAAGCTGGAAAACGTTTGGGACTTGACACTGTGCTGGTCGGTGCATCGCACAAAGTTCAAGGTGCGGACTATGTATTGGAAAGCATCCATAACCTTACTGAGGCAGTGCCTGATCTATGGGAGGCAGACGTAAAATCAGAAGTGGTTTACACTGAGAACCTTGCTAAGGAGACAACAGTAGCTGCTTAA 960 0.4156 MQTSSSLPLPIINHSGFNEMEREDHFAKNQKYDCLLFDLDDTLYPLSSGLANAILKNLEAYMVEKLGIEPSKTDDLCNLLYKNYGTTLSGLRAIGYEFDYDEYHSFIHGRLPYENLKPDPVLRNMLKSLPYRKLIFTNADKVHALKTLNILGLEDCFEGIICFETLNPVHQSGVSDDEDDIEFGGLPSAIKPITSDRASNSQIFDIISHFAQENPSGNLPKTPVVCKPSEKAIELALNIANINPHKTLFFEDSVRNIQAGKRLGLDTVLVGASHKVQGADYVLESIHNLTEAVPDLWEADVKSEVVYTENLAKETTVAA* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5404 319 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 20 319 - -
Psa7g5404 319 Pfam Haloacid dehalogenase-like hydrolase 227 270 IPR041492 -
Psa7g5404 319 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 20 319 - -
Psa7g5404 319 SUPERFAMILY HAD-like 31 297 IPR036412 -
Psa7g5404 319 Gene3D - 98 297 IPR023214 -
Psa7g5404 319 SFLD C1.5.3: 5'-Nucleotidase Like 28 298 IPR010237 -
Psa7g5404 319 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 33 270 IPR010237 -
Psa7g5404 319 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 223 270 IPR006439 -
Psa7g5404 319 SFLD Haloacid Dehalogenase 28 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5404 Psa-Chr7 466138528 466140977 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5404 K07025 - gmx:100787007 457.603