Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5381 TTATTGCGCCTATGGCAGAAGCTGCTTTGTCATGTGGAACTGTATCCGGTGATTTGGCTCCATGCCTTACTTATCTTCAAGCTTATGGCAGAAGCTGCTTTGTCATGTGGAACTGTATCCGGTGATTTGGCTCCATGCCTTACTTATCTTCAAGCTCCTAATAATGCCAGTCCTCCACCGCCATGCTGTGCAGGAGTGAAGAAGCTTCTTGCTGCCGCCACCACCACGCCGGATCGTCAGGCTGCCTGTAACTGCTTGAAATCAGCTGCCGGTTCTATTTCTAGATTGAATACTAACAATGCTGCTGCTCTCCCTGGCAAATGCGGTGTTAGCATTCCTTACAAGATCAGTACCTCCACCAACTGTAACACTGTTAGGTTTTGA 384 0.4818 LLRLWQKLLCHVELYPVIWLHALLIFKLMAEAALSCGTVSGDLAPCLTYLQAPNNASPPPPCCAGVKKLLAAATTTPDRQAACNCLKSAAGSISRLNTNNAAALPGKCGVSIPYKISTSTNCNTVRF* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5381 127 Pfam Probable lipid transfer 25 115 IPR016140 -
Psa7g5381 127 CDD nsLTP1 34 123 - -
Psa7g5381 127 PRINTS Plant phospholipid transfer protein signature 35 51 IPR000528 GO:0006869|GO:0008289
Psa7g5381 127 PRINTS Plant phospholipid transfer protein signature 57 71 IPR000528 GO:0006869|GO:0008289
Psa7g5381 127 PRINTS Plant phospholipid transfer protein signature 78 93 IPR000528 GO:0006869|GO:0008289
Psa7g5381 127 PRINTS Plant phospholipid transfer protein signature 95 112 IPR000528 GO:0006869|GO:0008289
Psa7g5381 127 PRINTS Plant phospholipid transfer protein signature 113 124 IPR000528 GO:0006869|GO:0008289
Psa7g5381 127 PANTHER - 20 123 IPR000528 GO:0006869|GO:0008289
Psa7g5381 127 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1-RELATED 20 123 - -
Psa7g5381 127 SMART aai_6 36 122 IPR016140 -
Psa7g5381 127 ProSitePatterns Plant lipid transfer proteins signature. 104 125 IPR000528 GO:0006869|GO:0008289
Psa7g5381 127 Gene3D - 33 127 IPR036312 -
Psa7g5381 127 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 125 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5381 Psa-Chr7 464719971 464720463 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5381 31 126 Acyl Lipid Metabolism Gene Families AT5G59320 62.500 1.01e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5381 - - mtr:MTR_4g428370 143.28