Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5356 ATGTCGCTATCGGATTCCGAAACCTCCTATGGCGGTGGCGGTGGATCGGATTATAAGCCTTTTCGTCATATCAGCCGCGATAGATTATTATATGAAATGCTTAGATCAGCTAAGTCAGCGGATTCAAAAGCATGGAAGGTGCTCATAATGGACAAAGTTACAGTGAAAGTTATGTCACATTCATGTAAAATGGCAGATATTACAGACCAGGAAGTTTCTTTGGTGGAAGACCTTTTCCGGAGAAGGCAACCGTTACCATCATTGGATGCTGTTTATTTCATCCAGCCTTCAAAAGAGAATGTAGTCATGTTCTTGTCTGATATGTCTGGAAGGGAGCCTCTGTACAAGAAAGCCTATATATTTTTCAGCTCACCAATCCCAAAGGAGCTTGTAAACCACATTAAATGTGATACAAGTGTCTTACCACGCATAGGAGCATTGAGAGAGATGAATTTGGAATACTTTCCAATAGATAGCCAGGGGTTTATCACTGATCAAGATACAGCACTGCAAGAACTTTATGGAAATGTTGACAATATTCGTAGATTCAATACCTACTTGAATAATATGGCGATTCGAATAGCTACAGTTTTTGCTTCATTGAAGGAGTTACCGCATATATACTATCGTTCGGCAAAGGAAAGTGACGAGTCTGCACCAACAGTAAGTCGTGAATTAGTTCCTACCAAGCTTGCTGATGCAGTTTGGGACATGGTTTCTAAATATAAATCTACTATTCCCAAATTTCCACAAAGTGAAACATGCGACCTACTCATTGTCGATAGATCTGTTGATCAGATTGCTCCTGTCATTCATGAATGGACCTATGATGCTATGTGCCATGATTTGTTGGATATGGAAGGAAATAAATATATACATGAGGTTGCCAGCAAAACAGGGGGTCCACCTGAGGAAAAGGAGGTCGTTCTAGAAGAACACGACTCAGTCTGGCTCGAACTTCGCCATTCACATATAGCAGATGCTAGTGAAAGATTGCATGAAAAGTTTACCACCTTTGTATCAAAGAACAAAGCAGCACAAATGCAACAAAGTGGAAGAGATGGTGGTGAAATATCTACGCGGGATTTGCAAAAAATGGTTCAAGCTTTGCCCCAATACACTGAGCAAGTAGAAAAGATTTCACTCCATGTAGAGATAGCTGGAAAGATCAACACAATCATCAGAGACGCAGCACTTCGAGAGCTTGGACAGTTGGAGCAAGATCTTGTTTTTGGGGATGCTGCAGCCAAGGACGTTATTAACTTTTTAAGAACAAAGCAGAATACAACTCCTGAATATAAGTTGCGGTTGTTGATGATCTATGCATCTGTCTACCCTGAAAAGTTTGAGGGTGATAAAGGTTTAAAGCTAATGCAGTTGGCAAAACTATCACCCGATGACATGAAAGTTATCAGTAATATGCAACTGCTGGCGGGATCATCAACAAAGAAGGCATCTGCTGCTGGTGCTTTCTCACTGAAGTTCAGTAACCAGAAGGAGCTCATTGAAAGTCTTAATAAGGGAGAACTGCCAAAGGGTGAATATGCATGTAAAAATGAACCAATTCCCGTTCCCAAAGGAAACTCTGCTCGAAATAGCAAGAGCACTCAGATAGCTCCAGCTCCAACAGCCCCTCCTCATTCAATGAGATCTAGGCGGACAGCCAACTGGGCTAAGTCACGTACTTCTGACGATGGATATTCAAGTGACTCCACGTTAAAGAACGTAGCTGCTGATTTCAAGAAGATGGGAAAGAGAATCTTTGTGTTTATTATTGGCGGGGCTACTCGATCTGAGCTACGTGTTTGTCACAAAATGACAACAAAACTGAGAAGAGAAGTAATCCTAGGCACTACCTCCATGGATGATCCTTCGCAATATCTTACGAAATTGAAGTTATTATGCGACAGTAGAGCTACTGTCACGCCAGACGGCCTTGGAATATGA 1947 0.4165 MSLSDSETSYGGGGGSDYKPFRHISRDRLLYEMLRSAKSADSKAWKVLIMDKVTVKVMSHSCKMADITDQEVSLVEDLFRRRQPLPSLDAVYFIQPSKENVVMFLSDMSGREPLYKKAYIFFSSPIPKELVNHIKCDTSVLPRIGALREMNLEYFPIDSQGFITDQDTALQELYGNVDNIRRFNTYLNNMAIRIATVFASLKELPHIYYRSAKESDESAPTVSRELVPTKLADAVWDMVSKYKSTIPKFPQSETCDLLIVDRSVDQIAPVIHEWTYDAMCHDLLDMEGNKYIHEVASKTGGPPEEKEVVLEEHDSVWLELRHSHIADASERLHEKFTTFVSKNKAAQMQQSGRDGGEISTRDLQKMVQALPQYTEQVEKISLHVEIAGKINTIIRDAALRELGQLEQDLVFGDAAAKDVINFLRTKQNTTPEYKLRLLMIYASVYPEKFEGDKGLKLMQLAKLSPDDMKVISNMQLLAGSSTKKASAAGAFSLKFSNQKELIESLNKGELPKGEYACKNEPIPVPKGNSARNSKSTQIAPAPTAPPHSMRSRRTANWAKSRTSDDGYSSDSTLKNVAADFKKMGKRIFVFIIGGATRSELRVCHKMTTKLRREVILGTTSMDDPSQYLTKLKLLCDSRATVTPDGLGI* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5356 648 MobiDBLite consensus disorder prediction 549 564 - -
Psa7g5356 648 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 273 396 IPR043127 -
Psa7g5356 648 Gene3D - 16 149 IPR043154 -
Psa7g5356 648 Gene3D - 161 272 IPR027482 -
Psa7g5356 648 MobiDBLite consensus disorder prediction 526 542 - -
Psa7g5356 648 PANTHER PROTEIN TRANSPORT SEC1A 22 634 - -
Psa7g5356 648 SUPERFAMILY Sec1/munc18-like (SM) proteins 22 634 IPR036045 -
Psa7g5356 648 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 22 634 IPR001619 GO:0016192
Psa7g5356 648 PIRSF VPS45_Sec1 16 642 IPR001619 GO:0016192
Psa7g5356 648 MobiDBLite consensus disorder prediction 522 564 - -
Psa7g5356 648 Pfam Sec1 family 46 629 IPR001619 GO:0016192
Psa7g5356 648 Gene3D - 397 488 - -
Psa7g5356 648 Gene3D - 547 637 IPR027482 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5356 Psa-Chr7 463620010 463632419 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5356 K15292 - gmx:100783301 1066.6