Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5289 ATGTCCAGCGAATCCGATGCACCCGTAACCAATCTCTCTTGTGCTAACTGCTCCAAACCTGCAAATCTTCAGTGTCCGAAATGCATGGAATTGAAGCTTCCTCGGGAAGGTTCTGCATTCTGCTCCCAAGAATGTTTTAAATCTTCATGGAGTTCACACAAATCAGTGCATCTAAAGGCAAAACTATCTTCAGCAGCTGGTACACAGAATTCAGACTCACTTGGTGAAGGATGGCTATATTGCGTGAAGAGAGGGCAGGGTCGAGCTCCAAAGCTTCCTTACTATGATTGGACTGGGGCGCTGCGGCCATATCCCATATCTCCCAAACGGATTGTCCCAGCTCATGTTGTTATACCTGATTGGGCTGATGATGGAATTCCCATAATTGAGCCCAATAGTGATCTGCAGCATACTGTTGAGATCAAGTCACCAGATCAAATTGAAAGAATGAGGGAAACTTGTCGGATTGGAAGAGAGGTGTTGGATGCTGCTGCTCGGATTATTCAGCCCGGCGTGACAACTGATGAAATTGATAGAGTAGTTCACGAGGCAATTATTGCTGCAGGAGGATACCCATCACCTCTCAATTACCATTTCTTTCCAAAATCTTGCTGCACGTCAGTTAATGAAGTGATCTGCCATGGAATTCCTGATGCAAGGAAGCTTGAGGATGGTGACATTGTAAATGTTGATGTCACTGTGTACTATAAAGGTGTTCATGGTGATCTCAATGAAACGTACTTTGTGGGAAATGTGGATGAAGAGTCCCGTCAGTTAGTCAAATGCACATATGAGTGCCTGGATAAGGCAATATCCATTGTTAAACCTGGGGTACGATTCCGTGAAGTTGGCGAAGTTATTAATCGTCATGCTTCAATGTCAGGCTTCTCAGTGGTAAAATCATATTGTGGTCATGGAATTGGAGAGCTTTTCCATTGTGCACCAAACATTCCTCATTATGGAAGAAATAAAGCAGTTGGTGTGATGAAGGCTGGTCAGACGTTTACAATTGAACCGATGATCAATGCAGGTGTCTGGCGAGATCGATTGTGGCCAGATGGATGGACTGCTGTTACAGCAGATGGTAAACGAAGTGCCCAATTTGAGCATACTCTTTTGGTGACAGAAACTGGTGTTGAAGTTTTAACAGGGAGGTTGCAGACATCACCCAATGTTTTTCCTTGGTTAAGTTCATAA 1197 0.4411 MSSESDAPVTNLSCANCSKPANLQCPKCMELKLPREGSAFCSQECFKSSWSSHKSVHLKAKLSSAAGTQNSDSLGEGWLYCVKRGQGRAPKLPYYDWTGALRPYPISPKRIVPAHVVIPDWADDGIPIIEPNSDLQHTVEIKSPDQIERMRETCRIGREVLDAAARIIQPGVTTDEIDRVVHEAIIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGVHGDLNETYFVGNVDEESRQLVKCTYECLDKAISIVKPGVRFREVGEVINRHASMSGFSVVKSYCGHGIGELFHCAPNIPHYGRNKAVGVMKAGQTFTIEPMINAGVWRDRLWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTGRLQTSPNVFPWLSS* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5289 398 CDD MetAP1 147 383 IPR002467 GO:0006508|GO:0070006
Psa7g5289 398 PANTHER METHIONINE AMINOPEPTIDASE 12 391 - -
Psa7g5289 398 Pfam Metallopeptidase family M24 148 376 IPR000994 -
Psa7g5289 398 Pfam zf-MYND-like zinc finger, mRNA-binding 15 58 IPR031615 -
Psa7g5289 398 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 302 320 IPR002467 GO:0006508|GO:0070006
Psa7g5289 398 SUPERFAMILY HIT/MYND zinc finger-like 10 55 - -
Psa7g5289 398 Gene3D - 6 56 - -
Psa7g5289 398 PRINTS Methionine aminopeptidase-1 signature 204 217 IPR001714 -
Psa7g5289 398 PRINTS Methionine aminopeptidase-1 signature 226 242 IPR001714 -
Psa7g5289 398 PRINTS Methionine aminopeptidase-1 signature 296 308 IPR001714 -
Psa7g5289 398 PRINTS Methionine aminopeptidase-1 signature 327 339 IPR001714 -
Psa7g5289 398 SUPERFAMILY Creatinase/aminopeptidase 93 384 IPR036005 -
Psa7g5289 398 Gene3D Creatinase/methionine aminopeptidase superfamily 95 394 IPR036005 -
Psa7g5289 398 TIGRFAM met_pdase_I: methionine aminopeptidase, type I 140 384 IPR002467 GO:0006508|GO:0070006
Psa7g5289 398 Hamap Methionine aminopeptidase [map]. 139 385 IPR002467 GO:0006508|GO:0070006
Psa7g5289 398 PANTHER METHIONINE AMINOPEPTIDASE 1 12 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5289 Psa-Chr7 460825464 460846393 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5289 K01265 - gmx:100785022 753.051