Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5281 ATGCGGTTCAAGTTAGGTAAGCGCGTGGTTCGCTTCACACGATGTTTCTTCCGGAGATTCCGGACCCGACCCGTTTACGTTCGACTCGGTTCCTCACCGGAGAAGAGTAACAACAACATGAAGAAGCTCCTAACATGGGGTCGGAAGTTAACCACAAAAGCGAAGTCTCTATGTACGAAGAAAAACTCCGGTTATTTGCCGGTTGGGACCGACCCGGTTCAGGGAAGCGGGTCAACTGTTCCGAAGGGTTATTTAGCGGTTTACGTGGGTCAGAAAGACGGTGAGTTTCGTCGGGTTTTGGTGCCGGTGGTTTATTTCAACCACCCTTTGTTCAGTGAGTTGTTGAAAGAAGCTGAGAAGGAGTATGGGTTTTATCACCAAGGTGGGATAACGATTCCGTGCCGGGTCAACGAGTTTGAACGGGTTAAGACCCGAATAGAATCCGGGTCGGGTGTACGGAATTTTACTCGGAGGAGGCTTCGTTGA 486 0.5021 MRFKLGKRVVRFTRCFFRRFRTRPVYVRLGSSPEKSNNNMKKLLTWGRKLTTKAKSLCTKKNSGYLPVGTDPVQGSGSTVPKGYLAVYVGQKDGEFRRVLVPVVYFNHPLFSELLKEAEKEYGFYHQGGITIPCRVNEFERVKTRIESGSGVRNFTRRRLR* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5281 161 Pfam Auxin responsive protein 61 143 IPR003676 GO:0009733
Psa7g5281 161 PANTHER SMALL AUXIN-UP RNA-RELATED 2 159 - -
Psa7g5281 161 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 159 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5281 Psa-Chr7 460487943 460489328 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5281 80 148 Calmodulin-binding Proteins AT3G43120 52.174 3.92e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5281 K14488 - gmx:100796005 196.052