Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5275 ATGGAGGGCAAGATGGGGATTTTGTTTCTGATTGTGTTGGGTGCTGCTTGGGTTTGTGATGCAAGAGAATTAGTAAACCCTGAATTAAACAGAAAACCAGACGTGTGTTCAGTTTGTGAGGAATATACAACTCAGGTACTTGATTATCTAAAGGATAACAATACTCAGGTAGAAATCATTGATTCACTTCACAATACATGCCATCAACTTCGATCTTTAAACCAGCAGTGCGGTAAATTGGTGGATTATTACGCCCCACTTTTCTTCTCAGAAATAGCTCCAATAAAGCCTGATGAGGTCTGCGAGAAGTTCAACCTTTGTGAGTCTGCAAAGATTTCTTCACAAGTTCATAGAAATAATAGCTGCGGCCTTTGCAAAGATACCATTGCAGCCTTATTGGTTGAGTTGAATGATCCTGACACTAAGCTAGAGATAATAGAGAAACTTCTGAAGGCTTGCAATTCTGTGGAGAAGTACAAGAAGGAGTGCAAGAAGGCGGTTTTTGAGTATGGACCGTTGATTCTAGCGAATGCGGAGAAGTTCCTGAAGACAACAGATATATGCACTGCATTACATGCCTGCCCTGCTTCCACTATTGTTATTCAGGAAGCTACAACCATGGAAGAAAAACCATTGCTTTCTGATTCTTAA 651 0.4055 MEGKMGILFLIVLGAAWVCDARELVNPELNRKPDVCSVCEEYTTQVLDYLKDNNTQVEIIDSLHNTCHQLRSLNQQCGKLVDYYAPLFFSEIAPIKPDEVCEKFNLCESAKISSQVHRNNSCGLCKDTIAALLVELNDPDTKLEIIEKLLKACNSVEKYKKECKKAVFEYGPLILANAEKFLKTTDICTALHACPASTIVIQEATTMEEKPLLSDS* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5275 216 PANTHER SAPOSIN-RELATED 1 205 - -
Psa7g5275 216 Gene3D - 32 108 - -
Psa7g5275 216 Gene3D - 118 197 - -
Psa7g5275 216 ProSiteProfiles Saposin B type domain profile. 118 198 IPR008139 -
Psa7g5275 216 SMART sapb_4 34 107 IPR008139 -
Psa7g5275 216 SMART sapb_4 120 194 IPR008139 -
Psa7g5275 216 PANTHER SAPOSIN-RELATED 1 205 - -
Psa7g5275 216 PRINTS Saposin signature 36 56 IPR008373 GO:0005764|GO:0006665
Psa7g5275 216 PRINTS Saposin signature 83 101 IPR008373 GO:0005764|GO:0006665
Psa7g5275 216 PRINTS Saposin signature 150 172 IPR008373 GO:0005764|GO:0006665
Psa7g5275 216 PRINTS Saposin signature 172 195 IPR008373 GO:0005764|GO:0006665
Psa7g5275 216 Pfam Saposin-like type B, region 2 161 194 IPR008138 -
Psa7g5275 216 Pfam Saposin-like type B, region 1 34 70 IPR007856 GO:0006629
Psa7g5275 216 ProSiteProfiles Saposin B type domain profile. 32 111 IPR008139 -
Psa7g5275 216 SUPERFAMILY Saposin 34 109 IPR011001 -
Psa7g5275 216 SUPERFAMILY Saposin 119 196 IPR011001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5275 Psa-Chr7 460113641 460116321 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5275 K12382 - gmx:100527899 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5275 7 460113641 460116321 Psa7g5275 7 460113641 460116321 ECH