Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5229 ATGTTCTATATAAACCCACACCTTGAATCACTTATACTCACTCACCAAGCAAAAGCAAAAGCAAATTTCAATCCATTCCCTAGAGAAGCAATGGCAAGCTTGAGAGTTTCTTGTGTAGTTGCTTTGATCTGCATGGTGGTTGTTAGTGCACCCATGGCAGAGGCTGCAATCTCGTGCGGAGCAGTAACTGGTGCCATTGCTCCATGCTTTGCTTATCTTAAGGGTGCTCCTGCTCCTTCACTGCAATGCTGTGCTGGAGTGAGGAGACTTAATGGGTCGGCCCAAACTATCGCCGACCGTAAGGCTGTTTGCAACTGCTTGAAAAGTGGTGCTGGTTCCGTTCCTGGTTTGAAGTCCGGCAATGTTGCTGCTCTCCCGGGCAAATGTGGTGTTAGACTTCCTTTCGCGATTAGCCCCTCTACCAACTGTAATGCCATCAGTTTCTAA 447 0.4787 MFYINPHLESLILTHQAKAKANFNPFPREAMASLRVSCVVALICMVVVSAPMAEAAISCGAVTGAIAPCFAYLKGAPAPSLQCCAGVRRLNGSAQTIADRKAVCNCLKSGAGSVPGLKSGNVAALPGKCGVRLPFAISPSTNCNAISF* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5229 148 PANTHER - 31 145 IPR000528 GO:0006869|GO:0008289
Psa7g5229 148 SMART aai_6 59 143 IPR016140 -
Psa7g5229 148 CDD nsLTP1 57 144 - -
Psa7g5229 148 ProSitePatterns Plant lipid transfer proteins signature. 125 146 IPR000528 GO:0006869|GO:0008289
Psa7g5229 148 PRINTS Plant phospholipid transfer protein signature 58 74 IPR000528 GO:0006869|GO:0008289
Psa7g5229 148 PRINTS Plant phospholipid transfer protein signature 78 92 IPR000528 GO:0006869|GO:0008289
Psa7g5229 148 PRINTS Plant phospholipid transfer protein signature 99 114 IPR000528 GO:0006869|GO:0008289
Psa7g5229 148 PRINTS Plant phospholipid transfer protein signature 116 133 IPR000528 GO:0006869|GO:0008289
Psa7g5229 148 PRINTS Plant phospholipid transfer protein signature 134 145 IPR000528 GO:0006869|GO:0008289
Psa7g5229 148 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 56 146 IPR036312 -
Psa7g5229 148 Pfam Protease inhibitor/seed storage/LTP family 59 143 IPR016140 -
Psa7g5229 148 Gene3D - 56 148 IPR036312 -
Psa7g5229 148 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 31 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5229 Psa-Chr7 457616391 457617560 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5229 42 147 Acyl Lipid Metabolism Gene Families AT3G51590 48.182 3.31e-28 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5229 - - mtr:MTR_4g428370 162.925