Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5207 ATGGGTAGCTTCAAGTTAGCATTTGTTATTATAATGTTCATGGCTTTGATGTATGCACAAAATGGTGGTGCAGTTCCATGTGGACAAATCTCAAGTAACCTTGTGCCATGCTTAGGTTATGTTCAGAATGGTGGTGCTGTTTCTCCGCGTTGTTGTTATGGCATTAGAGGGTTAGTTAATGCGGCTAGGACCACCGCTGACCGCCGTGCCGTTTGTGTTTGCTTGAAGTCAGCCGCTGCTTCTATCAAAAGAATCAATGTAGGCTATGCTGCTTCACTTCCAGGCAAATGTGGGGTTAATATCCCTTACAAGATCAGTGCTTCCACCAACTGTGCTAGTATTAGGTAA 348 0.4425 MGSFKLAFVIIMFMALMYAQNGGAVPCGQISSNLVPCLGYVQNGGAVSPRCCYGIRGLVNAARTTADRRAVCVCLKSAAASIKRINVGYAASLPGKCGVNIPYKISASTNCASIR* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5207 115 Gene3D - 24 115 IPR036312 -
Psa7g5207 115 SMART aai_6 27 111 IPR016140 -
Psa7g5207 115 PRINTS Plant phospholipid transfer protein signature 26 42 IPR000528 GO:0006869|GO:0008289
Psa7g5207 115 PRINTS Plant phospholipid transfer protein signature 46 60 IPR000528 GO:0006869|GO:0008289
Psa7g5207 115 PRINTS Plant phospholipid transfer protein signature 67 82 IPR000528 GO:0006869|GO:0008289
Psa7g5207 115 PRINTS Plant phospholipid transfer protein signature 84 101 IPR000528 GO:0006869|GO:0008289
Psa7g5207 115 PRINTS Plant phospholipid transfer protein signature 102 113 IPR000528 GO:0006869|GO:0008289
Psa7g5207 115 CDD nsLTP1 25 111 - -
Psa7g5207 115 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 113 - -
Psa7g5207 115 PANTHER - 1 113 IPR000528 GO:0006869|GO:0008289
Psa7g5207 115 Pfam Protease inhibitor/seed storage/LTP family 27 111 IPR016140 -
Psa7g5207 115 ProSitePatterns Plant lipid transfer proteins signature. 93 114 IPR000528 GO:0006869|GO:0008289
Psa7g5207 115 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 113 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5207 Psa-Chr7 456819943 456821026 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5207 4 115 Acyl Lipid Metabolism Gene Families AT5G59310 49.107 4.70e-31 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5207 - - gmx:100776812 140.198