Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5182 ATGAAAGAAACCAACGGTAAGAACAGCGTTGAAAAGCTAGATCAAGAACAAGATCTAGGACTGTATTTCCTGGAATTGTGTCGCCGGAAAGTGAAAGAAGAGTTGGAAGATTACGGCGGCGATGATGATGAGAAAGAAGAATCTCCGACGGAGCTCAACACTCTGAACAGTTCAGGAGGTTTTGTTGTTGTGGCTACTGATAAGCTTTCGGTGAAGTATGTGAGTGTTAATCTTCACGGTCATGATGTTGGTGTTATTCAAGCTAATAAAGTTGCTCCGATGAAGCGTCTTGTTTACTATTTCGAGATTACTGTTAAGGATGCTGGCGTTAAAGGTCAGGTTTCAATTGGATTTACGTCGGAGAATTTCAAGATGCGGAGACAGCCTGGGTGGGAGGCTAATAGCTGTGGATATCACGGGGATGATGGTCTCCTTTATCGTGGACAAGCCAAAGGGGAAACTTTTGGTCCAACCTATACCACTGGTGATATAGTTGGTGCCGGAATTAACTATGCTGCTCAGGAGTTTTTTTTCACTAAAAATGGGCGAGTTGTTGGCACAGTCTACAAAGACATGAAGGGTCCACTTTTCCCAACTGTTGCTGTTCATAGCCAGAATGAAGAGGTACATGTCAATTTTGGTCAGAAACCATATGCCTTTGATCTGAAGGAGTTTGAAGCACATGAAAGAATGAAGCAGCAAGTGAAAATAGAGGATATTCCTGTGGTACCAAATGCCAGTTATGGAATTGTCCGTTCCTACCTGCTACACTATGGCTATGAAGATACATTGGATTCATTTGATTTGGCTAGTAAGAGTACTGTTCCTCCTATAAATATAGTGGAAGATAATGGTATTGATGACCAGGAAACAACATATGCATTGAATCACAGAAAGACTCTCCGGCAGCTAATCAGGAATGGGGAGATTGATGTTGCATTTGGTAAATTGCGTGAATGGTATCCCCAGATTGCTGAGGACAATACATCAGCTATGTGTTTTCTGCTTCATTGCCAAAAGTTTATCGAACTAGTTCGGGCTGGAGCACTGGAGGAGGCTGTCAAATATGGAAGAAAAGAATTGTCAAGATTTTTTGGGTTGCCTGTCTTTGAGGATTTAGTTCAGGAATGTGTTGCTTTGCTTGCCTACGAACGGCCATTGGAATCTGCGATAGGTTATCTTCTAAAAGACTCGCAGCGTGAAATTGTAGCAGACACAGTAAATGCAATGATATTGTCCACAAATCCCAACATGAAAGAAGCAAAAAATTGCTTGCACTCCCATCTTGAGAGGTTACTTAGACAGCTCACTGCATGTTGCTCGGAGAGACGATCATTAAGTGGAAATCAAGGAGAAACTTTTCAACTTCAAAGAGTGCTTAGCATTGGTAAAAGAAGCTAG 1401 0.4197 MKETNGKNSVEKLDQEQDLGLYFLELCRRKVKEELEDYGGDDDEKEESPTELNTLNSSGGFVVVATDKLSVKYVSVNLHGHDVGVIQANKVAPMKRLVYYFEITVKDAGVKGQVSIGFTSENFKMRRQPGWEANSCGYHGDDGLLYRGQAKGETFGPTYTTGDIVGAGINYAAQEFFFTKNGRVVGTVYKDMKGPLFPTVAVHSQNEEVHVNFGQKPYAFDLKEFEAHERMKQQVKIEDIPVVPNASYGIVRSYLLHYGYEDTLDSFDLASKSTVPPINIVEDNGIDDQETTYALNHRKTLRQLIRNGEIDVAFGKLREWYPQIAEDNTSAMCFLLHCQKFIELVRAGALEEAVKYGRKELSRFFGLPVFEDLVQECVALLAYERPLESAIGYLLKDSQREIVADTVNAMILSTNPNMKEAKNCLHSHLERLLRQLTACCSERRSLSGNQGETFQLQRVLSIGKRS* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5182 466 Gene3D - 29 234 IPR043136 -
Psa7g5182 466 ProSiteProfiles B30.2/SPRY domain profile. 30 218 IPR001870 -
Psa7g5182 466 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 294 352 IPR006595 -
Psa7g5182 466 ProSiteProfiles LIS1 homology (LisH) motif profile. 243 275 IPR006594 GO:0005515
Psa7g5182 466 SMART SPRY_3 96 217 IPR003877 GO:0005515
Psa7g5182 466 CDD SPRY_RanBP_like 84 214 IPR044736 -
Psa7g5182 466 Pfam SPRY domain 99 215 IPR003877 GO:0005515
Psa7g5182 466 PANTHER RAN-BINDING PROTEIN M HOMOLOG 39 463 - -
Psa7g5182 466 SMART toby_final6 348 449 IPR013144 -
Psa7g5182 466 SMART ctlh 294 352 IPR006595 -
Psa7g5182 466 SUPERFAMILY Concanavalin A-like lectins/glucanases 56 219 IPR013320 -
Psa7g5182 466 PANTHER RAN BINDING PROTEIN 9-RELATED 39 463 - -
Psa7g5182 466 Pfam CTLH/CRA C-terminal to LisH motif domain 296 440 IPR024964 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5182 K23334 - gmx:100805319 766.533