Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5145 ATGGACATACTTACAGGAAGCTTCTTTATGTACTTGAAGATGATTATGGGAACTCTGAAGACAGAATTGATTCAGATGTGGCCAGACCTTATTCAGAAATCAAAAGATGGAGGAGTTGATGTCATTGAGACTTATGTTTTCTGGAATTTGCACGAACCGGTTCGAGGACAGTATAATTTTGAAGGTAGGGGGGATTTGGTTGGATTTGTGAAGGCAGTTGCTGCAGCAGGTCTGTATGTTCATCTCCGGATCGGTCCATACGCTTGTGCGGAATGGAATTACGGTGGTTTCCCTCTTTGGTTGCATTTTATTCCGGGAGTTAAGTTCAGAACTGATAATGAACCATTCAAGGAAGAGATGAAGCGGTTTACGGCGAAGATTGTGGATTTGATGAAGCAAGAGAATCTCTATGCATCACAAGGAGGACCTATTATTCTATCTCAGATTGAAAATGAGTATGGAAATGTTGATATACACTATGGTCCTGCTGGTAAATCCTACATCAATTGGGCAGCATCAATGGCTACATCTCTTGATACAGGTGTTCCATGGGTTATGTGCAAGCAAGTAAACGCGCCTGATCCAATTATTAACGCGTGCAATGGATTTTACTGCGATCAATTTACACCAAACTCTAACAACAAACCGAAAATGTGGACTGAGAATTATAGTGGATGGTTTCTTGCATTTGGAGGTGTTGTGCCTTATAGACCTGTAGAAGATCTTGCATTTGCTGTAGCACGCTTTTTTCATCGCGGTGGAACTTTTCAAAACTACTACATGTACCATGGAGGGACTAACTTTGGCCGCACGACTGGCGGACCTTTCATTTCCACTAGTTATGATTATGATGCACCTATTGATGAGTATGGAATTATTAGACAGCCCAAATGGGGTCATCTTAAAGATTTGCATAAGGCCATAAAGCTTTGTGAAGAAGCACTGATAGCTACTGATCCTACAATTTCGTCTCCCGGTCCAAATCTAGAGACTGCAGTTTACAAGACAGGAGCTGTATGCGCCGCCTTCCTTGCCAACACCGGTACAACCGATTCAACGGTAACTTTTAACGGCAATTCATATCAGTTGCCGGGGTGGTCTGTGAGCATCTTACCAGATTGCAGAAGTGTTATTCTTAATACTGCAAAGATTAATTCCGTGTCTATGACTTCAAGCTTCACAACTGAATTTTTAAAAGAGGTTGGTTCTTTGGAGAGTTCAAGTTTGAGATGGAGTTGGATTAGTGAACCGGTCGGTATTTCAAAGGCTGATGCATTCTCAAAATATGGACTACACGAGCAAATAAACACGACAGCTGATAGAAGTGACTACTTGTGGTACTCATTAAGCATTGTTGATGAAGATAATGCTGGTGCTCAACCTGTTCTTCACATTAAATCCCTTGGTCATGCCCTGCATGCTTTTATAAATGGAAAACTTGCAGGTAGTGGAACGGGAAAGAGTGGACGTGCTAAGGTCAAGGTGGACATCCCTATTACACTTGTAGCTGGAAAGAACACAATTGATCTCCTGAGTTTAACAGTGGGATTACAGAACTATGGAGCATTTTATGACAGAGTGGGTGCGGGGATCACTGGTCCGGTAATATTGAAAGGTTTGAAAAATGGAAGTACCGTCGATCTCTCGTCCCAGCAGTGGACGTATCAGGTTGGACTTCAAGGTGAAGATTTAGGTCTGTCTAGTGGAAGTGTTGGACAGTGGAATTCACAGTCTACCTTACCTACAAATCAACCTTTGACTTGGTACAAGACAAAATTTGTTGCCCCTTCCGGAAGTAACCCGGTTGCAATTGACTTCACGGGGATGGGAAAAGGCGAAGCTTGGGTGAACGGACAGAGCATTGGGCGATACTGGCCAACATACATCGCTTCAAAATCTGGTTGTACTAACTCATGCAATTATAGAGGATCCTATTCTTCATCCAAATGTCTCAAGAACTGTGGAAAACCGTCACAGACATTATATCATGTACCGCGGTCATGGTTGCGATCAGACAGCAACATTCTTGTATTGTTCGAGGAAAACGGAGGCGACCCTACAAAAATATCTTTTACTACAAAACAGACAGAAAGTGTGTGCTCGCATGTATCAGAATCTCACCCTCCACCTATAGACTCGTGGAATTCGGATACAGAATCAGGAAGAAACATTGGTCCGGTACTGTCATTAGATTGCCCTTATCCTAATCAGGTGATCTCTTCTATTAAATTTGCAAGCTTTGGAACTCCTCATGGAACTTGCGGAAACTTCAACCAGGGACGCTGCAACAGCAATAAGGCTCTACCCATTGTGCAGAAGGCCTGCATTGGATCGAGCAGTTGTAATATTGGAGTATCAGTTAATACATTTGGAAATCCATGTCAAGGAGTAACAAAGAGTTTAGCGGTTGAAGCTGCTTGTACATAG 2427 0.4265 MDILTGSFFMYLKMIMGTLKTELIQMWPDLIQKSKDGGVDVIETYVFWNLHEPVRGQYNFEGRGDLVGFVKAVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGVKFRTDNEPFKEEMKRFTAKIVDLMKQENLYASQGGPIILSQIENEYGNVDIHYGPAGKSYINWAASMATSLDTGVPWVMCKQVNAPDPIINACNGFYCDQFTPNSNNKPKMWTENYSGWFLAFGGVVPYRPVEDLAFAVARFFHRGGTFQNYYMYHGGTNFGRTTGGPFISTSYDYDAPIDEYGIIRQPKWGHLKDLHKAIKLCEEALIATDPTISSPGPNLETAVYKTGAVCAAFLANTGTTDSTVTFNGNSYQLPGWSVSILPDCRSVILNTAKINSVSMTSSFTTEFLKEVGSLESSSLRWSWISEPVGISKADAFSKYGLHEQINTTADRSDYLWYSLSIVDEDNAGAQPVLHIKSLGHALHAFINGKLAGSGTGKSGRAKVKVDIPITLVAGKNTIDLLSLTVGLQNYGAFYDRVGAGITGPVILKGLKNGSTVDLSSQQWTYQVGLQGEDLGLSSGSVGQWNSQSTLPTNQPLTWYKTKFVAPSGSNPVAIDFTGMGKGEAWVNGQSIGRYWPTYIASKSGCTNSCNYRGSYSSSKCLKNCGKPSQTLYHVPRSWLRSDSNILVLFEENGGDPTKISFTTKQTESVCSHVSESHPPPIDSWNSDTESGRNIGPVLSLDCPYPNQVISSIKFASFGTPHGTCGNFNQGRCNSNKALPIVQKACIGSSSCNIGVSVNTFGNPCQGVTKSLAVEAACT* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5145 808 Pfam Glycosyl hydrolases family 35 25 307 IPR031330 -
Psa7g5145 808 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 141 153 IPR019801 GO:0004553|GO:0005975
Psa7g5145 808 Gene3D - 722 808 IPR043159 -
Psa7g5145 808 Pfam Beta-sandwich domain in beta galactosidase 315 384 IPR041392 -
Psa7g5145 808 Gene3D Glycosidases 5 311 - -
Psa7g5145 808 ProSiteProfiles SUEL-type lectin domain profile. 722 808 IPR000922 GO:0030246
Psa7g5145 808 Gene3D - 389 538 - -
Psa7g5145 808 SUPERFAMILY Galactose-binding domain-like 552 717 IPR008979 -
Psa7g5145 808 SUPERFAMILY (Trans)glycosidases 25 312 IPR017853 -
Psa7g5145 808 Gene3D - 555 700 - -
Psa7g5145 808 PANTHER BETA-GALACTOSIDASE 24 802 - -
Psa7g5145 808 PANTHER BETA-GALACTOSIDASE RELATED 24 802 IPR001944 GO:0004553|GO:0005975
Psa7g5145 808 Pfam Galactose binding lectin domain 730 807 IPR000922 GO:0030246
Psa7g5145 808 PRINTS Glycosyl hydrolase family 35 signature 27 45 IPR001944 GO:0004553|GO:0005975
Psa7g5145 808 PRINTS Glycosyl hydrolase family 35 signature 82 101 IPR001944 GO:0004553|GO:0005975
Psa7g5145 808 PRINTS Glycosyl hydrolase family 35 signature 139 154 IPR001944 GO:0004553|GO:0005975
Psa7g5145 808 PRINTS Glycosyl hydrolase family 35 signature 218 233 IPR001944 GO:0004553|GO:0005975
Psa7g5145 808 PRINTS Glycosyl hydrolase family 35 signature 255 270 IPR001944 GO:0004553|GO:0005975
Psa7g5145 808 PRINTS Glycosyl hydrolase family 35 signature 275 291 IPR001944 GO:0004553|GO:0005975
Psa7g5145 808 PRINTS Glycosyl hydrolase family 35 signature 584 598 IPR001944 GO:0004553|GO:0005975
Psa7g5145 808 PRINTS Glycosyl hydrolase family 35 signature 611 627 IPR001944 GO:0004553|GO:0005975
Psa7g5145 808 SUPERFAMILY Galactose-binding domain-like 368 540 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5145 Psa-Chr7 450263079 450267925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5145 25 661 Glycoside Hydrolase AT2G28470 74.074 0.0 994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5145 - - gmx:100793198 1414.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5145 7 450263079 450267925 Psa7g5145 7 450263079 450267925 ECH