Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5139 ATGATGTTGAAGAAGCAATCTCATCTCTTGTCCTTCTCACTTGCAATACTAGTTTCTCTCTTGTATTCGACAACCACTACTTTATCTCAATTATCACCTGCTAATGCTCCTATACAACCTACACTTCCAGCTCCAACCCAACCAGCTGCATCCCCTAAACCATTGGTACCTTCCTTACCAGAATCACCTACTGACTCCACTCCTGACACTGCAGGCACAGTTGACATCGTCGGAATCCTAAGAAAAGCCAAGTCATTCAACGTCCTAATCCGACTCATGAAAACGACTCAATTGATCAACCAACTCAATTCGCAACTATTGACTACAAAAACAGGTGGCTTAACAGTTCTTGCACCAGATGACAGTGCTTTCTCAGAACTCAAAGCAGGATTCCTCAACTCTCTTTCCGATGGACAGAAACTCGAGCTCTTACAGTTCCATGTTATTTCAGACTACGTATCAAGCTCTAACTTTGATATTCTAACCAACCCAGTGAGAACACTTGCCGGAGCTAAACCAGGAAAGGTGGAACTGAATGTTGTGAGTTACGGTGGCAGTGTGAACATATCAACAGTCGCTAAGGCGCCTACAAAGGGTCCGGCTTTGGCACCAGAACCTTCTGCACTGACTCCAAAAGCAGAAAAGGAGAAACCACTATCACCAGATTCCTCTGATTCATCTCAAGCTAAGCCCTCGAATGATAAATCTGGTACTCTAAAAATCAATGCTCATGGAAAGTGGATATCTCTTTTTGTTGGAGCAGTTATGTTAACTTCATTGTCTGCATGA 789 0.4335 MMLKKQSHLLSFSLAILVSLLYSTTTTLSQLSPANAPIQPTLPAPTQPAASPKPLVPSLPESPTDSTPDTAGTVDIVGILRKAKSFNVLIRLMKTTQLINQLNSQLLTTKTGGLTVLAPDDSAFSELKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDILTNPVRTLAGAKPGKVELNVVSYGGSVNISTVAKAPTKGPALAPEPSALTPKAEKEKPLSPDSSDSSQAKPSNDKSGTLKINAHGKWISLFVGAVMLTSLSA* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5139 262 Gene3D FAS1 domain 56 202 IPR036378 -
Psa7g5139 262 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 192 255 IPR045003 -
Psa7g5139 262 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 191 IPR045003 -
Psa7g5139 262 MobiDBLite consensus disorder prediction 44 70 - -
Psa7g5139 262 MobiDBLite consensus disorder prediction 44 61 - -
Psa7g5139 262 ProSiteProfiles FAS1/BIgH3 domain profile. 73 172 IPR000782 -
Psa7g5139 262 MobiDBLite consensus disorder prediction 222 238 - -
Psa7g5139 262 Pfam Fasciclin domain 85 191 IPR000782 -
Psa7g5139 262 SUPERFAMILY FAS1 domain 71 191 IPR036378 -
Psa7g5139 262 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 191 - -
Psa7g5139 262 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 192 255 - -
Psa7g5139 262 SMART fasc_3 115 212 IPR000782 -
Psa7g5139 262 MobiDBLite consensus disorder prediction 194 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5139 Psa-Chr7 450186249 450187264 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5139 - - gmx:100790242 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5139 7 450186249 450187264 Psa7g5139 7 450186249 450187264 ECH