Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5093 ATGAGAACAAGCAACCACTTAATCGGTGTACTAAACTTCCTAACCTTCCTTCTCTCAATCCCAATCCTAGGCGGTGGAATATGGCTAAGCAGCCGAGCAAACAACACCGACTGTCTCAAATTCCTCCAATGGCCACTAATCATAATCGGCATAAGCATCATGGTTGTTTCATTAGCCGGTTTCGCCGGCGCGTGTTACAGAAACACCTTTCTCCTACGGCTCTACCTCGTCGTCATGTTTTGCGTCATCGCTGTTCTTATAGGCTTCATAATCTTTGCCTATGTCGTAACCGATAAAGGCTCCGGAAGAGGCCTTTCGAATAAAGGCTATTTGGATTATTACCTGGAAGATTATTCTGGGTGGTTAGAGGAACGTGTTGCCAGGGATGGTTACTGGGGGAAGATTAGTTCTTGTATAAGGGATTCTAAAGTTTGTCGTAAATTAGCCAGGAATTTTAACGGTCAGCCGGAAACTGCTGATATGTTCTTCCAGAGAAAACTTTCTTCTGTTCAGTCTGGTTGCTGCAAACCTCCAACAGATTGTGGCTTCATGTATCAAAATGAAACAGTGTGGATGCCAGGAGTAGGACTAATAGCAAACAACCCTGACTGCACTAAATGGAACAATGACCAACAAGAGCTTTGTTATAGCTGTGATTCTTGCAAAGCTGGTGTACTTGCTAGTCTCAAGAAAAGTTGGAGGAAAGTATCAGTGATCAACATCATTGTTATGATCATCCTTGTAATTGTTTACATAGTTGCTTACTATGCTTATAGAAACAACCGCAGGATGGATAATGATGAGTCTTATGGTGAAGCAAGGATGACAAAATCACAACCAAGTGCTTTTCATCTTTGA 858 0.4231 MRTSNHLIGVLNFLTFLLSIPILGGGIWLSSRANNTDCLKFLQWPLIIIGISIMVVSLAGFAGACYRNTFLLRLYLVVMFCVIAVLIGFIIFAYVVTDKGSGRGLSNKGYLDYYLEDYSGWLEERVARDGYWGKISSCIRDSKVCRKLARNFNGQPETADMFFQRKLSSVQSGCCKPPTDCGFMYQNETVWMPGVGLIANNPDCTKWNNDQQELCYSCDSCKAGVLASLKKSWRKVSVINIIVMIILVIVYIVAYYAYRNNRRMDNDESYGEARMTKSQPSAFHL* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5093 285 Pfam Tetraspanin family 6 254 IPR018499 GO:0016021
Psa7g5093 285 PRINTS Transmembrane four family signature 6 29 - -
Psa7g5093 285 PRINTS Transmembrane four family signature 39 65 - -
Psa7g5093 285 PRINTS Transmembrane four family signature 66 94 - -
Psa7g5093 285 PANTHER TETRASPANIN-8-RELATED 1 280 IPR044991 GO:0009734|GO:0016021
Psa7g5093 285 PANTHER TETRASPANIN-4 1 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5093 Psa-Chr7 447041994 447045832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5093 1 276 Miscellaneous Gene Families AT5G60220 71.739 8.00e-128 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5093 - - gmx:100798336 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5093 7 447041994 447045832 Psa7g5093 7 447041994 447045832 ECH