Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5083 ATGGCATCTTCCCGAATCATCTCTCATTCTCAACCCAATCTCCACCGTCAGTCTTCCCCCTTTGACTCCGTCAAACCTCTTCCGTCTCTCAATCTCAACCTTCACCCGAAACGACACCGTAACCTCCGCATTCGTGCTTCCCTCAACGACACTTCGCATTCCGTTGAATTGCGAACTAGCCCCGTCTCCGCCGTCTCAAACGACGTCGTTTCCAAAGATCCGCACGCTCTTCCTCGGCCTTTGTCTTCGAATCAGTTATCTAGTGCTGTTTCCGATGGTTCAGGACTTCGTGTTGCTTATCAGGGAGTTCAAGGTGCTTACAGTGAATCTGCGGCACAAAAAGCTTACCCTAATTGTGAAGCTGTGCCTTGTGAACAATTTGATACCGCTTTTGAATCTGTTGAAAGGTGGCTTGTGGACAGAGCAGTTTTGCCAATTGAGAATTCTTTAGGAGGGAGCATCCACAGGAATTATGACCTTTTACTCAGGCACAGGCTACATATAGTAGGAGAAGTAAAATATGCAGTCCATCATTGTTTGATGGCCAACCATGGTGTTAAACTTGAGAATTTGAAGCGTGTTCTTAGTCATCCTCAGGCTCTTGCACAATGTGAGAACACCTTGACAGGATTGGGCTTAGTCAGAGAAGCTGTTGATGATACAGCCGGTGCTGCAAAGCATGTTGCTTTCCATAAACTACAAGATGCAGGAGCTGTTGCTAGCTCAGCTGCCGCAGAGATCTATGGCTTAAATATACTTGCTCAAGACATCCAGGATGATAGTGATAATATCACTCGATTTTTAGTGTTGGCGCGAGAACCTATACTTCCAGGCACAGACAGGCCATTTAAGACAAGCATAGTTTTCTCCTTAGAAGAGGGACCTGGGATACTTTTCAAGGCCCTTGCTGTTTTTGCGCTGCGTCAAATTAATCTTTCAAAGATTGAAAGCCGTCCTTTGCGGAAGCAACCTCTTAGAACATCTGATGATAACAACAATAGGTACTTTGATTATCTTTTCTATGTTGATTTTGAAGCATCAATGGCTGATCAGAATGCACAAAATGCCTTAAGGCATCTAATGGAGTTTGCTACATTCTTGCGAGTGCTAGGGAGTTATCCTTTGGATACTAGCATGGCGTAA 1143 0.4488 MASSRIISHSQPNLHRQSSPFDSVKPLPSLNLNLHPKRHRNLRIRASLNDTSHSVELRTSPVSAVSNDVVSKDPHALPRPLSSNQLSSAVSDGSGLRVAYQGVQGAYSESAAQKAYPNCEAVPCEQFDTAFESVERWLVDRAVLPIENSLGGSIHRNYDLLLRHRLHIVGEVKYAVHHCLMANHGVKLENLKRVLSHPQALAQCENTLTGLGLVREAVDDTAGAAKHVAFHKLQDAGAVASSAAAEIYGLNILAQDIQDDSDNITRFLVLAREPILPGTDRPFKTSIVFSLEEGPGILFKALAVFALRQINLSKIESRPLRKQPLRTSDDNNNRYFDYLFYVDFEASMADQNAQNALRHLMEFATFLRVLGSYPLDTSMA* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5083 380 ProSiteProfiles ACT domain profile. 286 374 IPR002912 -
Psa7g5083 380 SUPERFAMILY Periplasmic binding protein-like II 97 278 - -
Psa7g5083 380 Gene3D - 181 260 - -
Psa7g5083 380 SUPERFAMILY ACT-like 267 375 IPR045865 -
Psa7g5083 380 PANTHER AROGENATE DEHYDRATASE 26 379 - -
Psa7g5083 380 MobiDBLite consensus disorder prediction 1 23 - -
Psa7g5083 380 Gene3D - 279 377 - -
Psa7g5083 380 CDD ACT_CM-PDT 284 374 - -
Psa7g5083 380 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 26 379 - -
Psa7g5083 380 ProSitePatterns Prephenate dehydratase signature 1. 248 270 IPR018528 GO:0004664|GO:0009094
Psa7g5083 380 CDD PBP2_Ct-PDT_like 97 274 - -
Psa7g5083 380 Gene3D - 92 180 - -
Psa7g5083 380 Pfam Prephenate dehydratase 98 274 IPR001086 GO:0004664|GO:0009094
Psa7g5083 380 ProSiteProfiles Prephenate dehydratase domain profile. 97 272 IPR001086 GO:0004664|GO:0009094
Psa7g5083 380 ProSitePatterns Prephenate dehydratase signature 2. 312 319 IPR018528 GO:0004664|GO:0009094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5083 Psa-Chr7 446397235 446403074 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5083 K05359 - gmx:100787387 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5083 7 446397235 446403074 Psa7g5083 7 446397235 446403074 ECH