Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5052 ATGGATGATGAATTGCTCGAGTTGCAGAGACAGTTCGAGTTCGCTCAACAAGCGAAGTCCAGTATCCGATTATCGGATCGAAACGTCGTCGAATTAGTCCAGAAACTGCAGCAACTTCAAATCATCGATTTCGAGCTTCTTCACACTGCTTCTGGCAAAGAGTACATCACTCTCGATCAACTGAGAAATGAGATGGTGACTGAGGTGAAGAGATTAGGGCGAATTTCTGTGATTGATCTTGCTGATGTTACTGGAGTTGATTTGTACTATGTTGAGAAATTGTCTCAGAATATTATAACTGATCACGGAGAATTGATGTTGACTCAAGGGGAAATAATTACTGAAGCTTACTGGGATTCAATTGCTGAAGAGATTAACGAGAGGCTTCAAGAATGTAGTCAGATTGCTTTGACAGAACTCGCAGCGCAATTGAATGTTGGTTTGGATTTGATTGCTTCCGTGTTGGAGCCGCGCCTTGGAACTATAGTGAAGGGAAGGCTTGAAGGTGGGCAGTTGTATACTCCTGCCTATGTTGCTCGTGTTAGTGCCATGGTTCGAGGTGCTGCTAGGGGTATTACAGTTCCAACAAATTTGACAGTGTTATGGAGCTCGTTGCAGAATTTACTGCAAGAAATGGATGGAGCCAGTGGTGTTGCTGTTGATGGATCTTTCTTCCAGTCTTTGTTTAATGGACTTGTGAAGAGAGGTGAAATTTCAGGGTCTGTTCGTGCTGGAGTGCATTGGACACCAGCTGTATTTGCTGTTGCTCAAAAGGAATCTGTGGATTCATTCTTTTCACAAAATTCTTTTATCAGCTATGACGTTCTGCAAAAACTTGGAATTCCCCAGCCCGTTCAATTCTTGCAGTCCAGATATCCTGAAGGCAAACCTCTTGTTACAACATTTGTTCACCCATCAATGATTGAGATGCTAGATGCTGCTACCGAGGATGCTTTAGAACGTGGCAGCTGGAGCGATTCTCTTTCCTTATTGCCCCCATCTTTTACACCTCAAGATGCATCTAAAATGTTGTTCCTCTGTCAATCTGTACAATTGGCCCTTAAGTCTAACAAAGCGCATATATTTGGGGACTTCTATGTATTGAGCAGCAGCTTTATGAAGGACATTTGCGATCGTACAGTGAAAGAATTAGAGACCTTAGCTGTTTCAAGGTCTTTGGGCACTGTAAAACCTGGTGATTTACCAATAGCCAATGAAGTAAAAGCAGGGTATGATTCAAGCAGGTTGAGTGAGTCCAGTGAAATGGCAAGTGACGGTGGTTCCAACAAGCATGCTGATAAAGGGCCAAAGAAGAAAAGAGGGAAAGCCACTGGAAATACATTAGCAAATCAATCTGAAAGTGGTGCTGATAACCAAGAGCATACTTCTACCAAATCTAAGAAAAGCCAGCGAAGGGGTAAGGATACATCTTCACAAACATCAGATTCAAAGCAAGGTTCTAGGAAAGAATCACTTAAAATGAAAGAGGATAATCTCAGTAGTCCCTCAGAAGAATGGATCATGGAGAAGATTACAGCCTTGATTCCTGATTTTGAAGAACAAGGTATTGATGATCCTGAAACGATTCTTAGGCCTTTGGCTAACAAGTTAAGGCCTACAATAATCAATACTTGGACGGAGAAAAGGAAGGCATTGTTTAAAGACAATGCAGAAAGAATGAAACAATTGCTTGATAATTTGCAGAAAAAGCTTGATGAGTCTTTCTTAAACATGCAACTGTATGAGAAAGCCTTAGAATTGTTTGAAGATGATCAATCAACTTCTGTTGTTTTGCATAGGCATTTACTAAGGACAGTAGCAGCTCCTATGGTTGACATGCTTCTTCATGACTTGGATGAGCACAACAAATTAAAGAACGGAGTAGAAGTGCAGGAATCTCCAAATTCTGAGTCTATTTCGTTTAGTCCTGGAGATAGAGCTGCAATTTCCAAGAGTTTTCCAGGAGCTCTTGCAAATAAGGCTCTGGCTGTTGTAGAAGCATTAGAAGGAAAGAGGGTGGAAACATTCATGTCTTCATTCAGAGCTGTGACAGAAGAGAGCGGGTTGCCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACACTTCTACATTCATATCGTAAGGTAATGTACTGA 2136 0.4134 MDDELLELQRQFEFAQQAKSSIRLSDRNVVELVQKLQQLQIIDFELLHTASGKEYITLDQLRNEMVTEVKRLGRISVIDLADVTGVDLYYVEKLSQNIITDHGELMLTQGEIITEAYWDSIAEEINERLQECSQIALTELAAQLNVGLDLIASVLEPRLGTIVKGRLEGGQLYTPAYVARVSAMVRGAARGITVPTNLTVLWSSLQNLLQEMDGASGVAVDGSFFQSLFNGLVKRGEISGSVRAGVHWTPAVFAVAQKESVDSFFSQNSFISYDVLQKLGIPQPVQFLQSRYPEGKPLVTTFVHPSMIEMLDAATEDALERGSWSDSLSLLPPSFTPQDASKMLFLCQSVQLALKSNKAHIFGDFYVLSSSFMKDICDRTVKELETLAVSRSLGTVKPGDLPIANEVKAGYDSSRLSESSEMASDGGSNKHADKGPKKKRGKATGNTLANQSESGADNQEHTSTKSKKSQRRGKDTSSQTSDSKQGSRKESLKMKEDNLSSPSEEWIMEKITALIPDFEEQGIDDPETILRPLANKLRPTIINTWTEKRKALFKDNAERMKQLLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTVAAPMVDMLLHDLDEHNKLKNGVEVQESPNSESISFSPGDRAAISKSFPGALANKALAVVEALEGKRVETFMSSFRAVTEESGLPLKKLDKKLERTLLHSYRKVMY* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5052 711 Coils Coil 550 584 - -
Psa7g5052 711 MobiDBLite consensus disorder prediction 486 503 - -
Psa7g5052 711 MobiDBLite consensus disorder prediction 444 459 - -
Psa7g5052 711 Pfam E3 UFM1-protein ligase 1 4 288 IPR018611 GO:0061666|GO:0071569
Psa7g5052 711 PANTHER E3 UFM1-PROTEIN LIGASE 1 1 708 IPR018611 GO:0061666|GO:0071569
Psa7g5052 711 MobiDBLite consensus disorder prediction 460 478 - -
Psa7g5052 711 MobiDBLite consensus disorder prediction 411 503 - -
Psa7g5052 711 MobiDBLite consensus disorder prediction 412 426 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5052 1 708 EF-hand Containing Proteins AT3G46220 60.674 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5052 K22755 - gmx:100808087 1137.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5052 7 443697835 443703814 Psa7g5052 7 443697835 443703814 ECH