Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5047 ATGGAGTCTCTCTCTTTAATTTATGTAGTTCCAGCATTGTACTTGTGTTTCCTATTATGGAAACTATTGGATCAAAAGAGGGACCAAGCATGTTACATATTAGATTACCAATGTCACAAACCAACACAAGATAGAATGTTAGGGACAGAGTTCTGTGGCAAAATAATCAAAAGAACTGAGAATTTGGGTCTAGATGAGTACAAATTTCTTCTCAAAGCCATAGTAAGTTCCGGCATCGGCGAGCAAACTTACGCGCCAAGAAACATCTTCGAAGGCCGCGAAGCATCGCCAACAATCCATGACGGGATCTCGGAGATGGAAGATTTTTTCGACGATAGCATTGTGAAACTCCTAGCGCGGTCGAAAATTTCCCCTTCGGAAATCGACATCCTCGTTGTCAACGTCTCGATGTTCTCCTCGCTTCCGTCTCTATCCGCGCGAATCATCAACCGTTACAAACTTCGGCACGACGTAAAAGTGTACAACCTCACCGGAATGGGCTGCAGTGCTAGTCTTGTATCACTAGACATTGTTCAAAACATTTTCAAATCCCAAAGAAACAAGTTAGCACTTTTGGTCGCATCAGAATCTCTTAGTCCAAATTGGTATCCCGGAAACAGCAAATCAATGATCCTTGCCAACTGTCTCTTCCGGTCGGGCGGATGCGCGATTCTTCTAACAAACAAAAGATCCTTAAAGAACAAAGCCATACTCAAACTGAAGTGTTTAGTAAGAACTCACCACGGCGCGAGAGACGAGTCCTTCGGTTGTTGTATTCAGAAAGAAGATGAGCAAGGTAGGAGAGGTATTTTCCTAGGAAAAACTCTCCCAAAAGCCGCAACAAGAGCGTTTGTCGACAATCTAAGAGTAATATCACCCAAAATTTTACCAACAAGAGAACTATTTAGGTTTCTTTTAGTGTCACTTTTGGAGAAACTTAAAACAATAAGTTGTTATTCCAAGTCTTGTAGTGGTGGAGGAACAATAAGTACAAAAAAATCACCATTGAATTTCAAAACCGGTGTTGATCATTTTTGTCTCCATACAGGAGGAAAATCAGTGATAGATGGAGTTGGAATGAGTTTAGATCTAAGTGAATATGATCTTGAGCCAGCAAGGATGACACTTCATCGTTTTGGTAACACTTCTGCTAGTAGTTTGTGGTATGTGTTAGGTTACATGGAAGCAAAAAAGAGATTAAAAAAAGAAACTTTGGTTAATCCTTTCATGGAGATGTATGGTTGGGTTAATCAAGTTGAGGATGTAAACAATGTTGAACTTCCTGATTTTCTTAAGTGA 1299 0.4034 MESLSLIYVVPALYLCFLLWKLLDQKRDQACYILDYQCHKPTQDRMLGTEFCGKIIKRTENLGLDEYKFLLKAIVSSGIGEQTYAPRNIFEGREASPTIHDGISEMEDFFDDSIVKLLARSKISPSEIDILVVNVSMFSSLPSLSARIINRYKLRHDVKVYNLTGMGCSASLVSLDIVQNIFKSQRNKLALLVASESLSPNWYPGNSKSMILANCLFRSGGCAILLTNKRSLKNKAILKLKCLVRTHHGARDESFGCCIQKEDEQGRRGIFLGKTLPKAATRAFVDNLRVISPKILPTRELFRFLLVSLLEKLKTISCYSKSCSGGGTISTKKSPLNFKTGVDHFCLHTGGKSVIDGVGMSLDLSEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKKETLVNPFMEMYGWVNQVEDVNNVELPDFLK* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5047 432 PANTHER 3-KETOACYL-COA SYNTHASE 1 410 IPR012392 GO:0006633|GO:0016020|GO:0016747
Psa7g5047 432 SUPERFAMILY Thiolase-like 18 231 IPR016039 GO:0016746
Psa7g5047 432 PANTHER 3-KETOACYL-COA SYNTHASE 1 410 - -
Psa7g5047 432 Pfam Chalcone and stilbene synthases, C-terminal domain 345 403 IPR012328 -
Psa7g5047 432 SUPERFAMILY Thiolase-like 243 403 IPR016039 GO:0016746
Psa7g5047 432 CDD CHS_like 12 402 - -
Psa7g5047 432 Pfam FAE1/Type III polyketide synthase-like protein 25 310 IPR013601 GO:0006633|GO:0016020|GO:0016747
Psa7g5047 432 Gene3D - 65 410 IPR016039 GO:0016746
Psa7g5047 432 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 408 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5047 Psa-Chr7 443431193 443432620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g5047 19 429 Acyl Lipid Metabolism Gene Families AT2G28630 63.377 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5047 K15397 - gmx:100810048 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5047 7 443431193 443432620 Psa7g5047 7 443431193 443432620 ECH