Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g5008 ATGTCGGTGAATTCGAGTTCCAGAGGAAGAATAGGAGCCAGAGAAACCAGTCCAGAGAGAACAAAAGTTTGGACCGAACCCAAACCCAAAACGACCAGAAAAGTTTCCGTCGTTTACTACCTCTCCCGTAACGGCCAACTCCAACACCCTCATTTCATGGAAGTTCCTCTTTCTTCCCCTCACGGACTATACCTCAAAGACGTGATCGTTCGCTTGAACCTGCTCCGTGGGAAAGCCATGGCTACTATGTACTCTTGGTCTTCCAAACGGAGTTATAAAAACGGTTTCGTTTGGCATGATTTATCGGAGAATGATTTCATATATCCAACGCAAGGGCAAGACTACATTCTCAAAGGATCTGAGATTCTCGATCACGTTACTACCACCGCTCAAACGCCGTTTGAGGAAGAATCTGATTCTCCGGTGGTGATTACGCGGCGGCGCAACCAGTCATGGAGTTCGATTGACTTGAACGAGTACCGAGTTTATAAGTCGGAGTCGTTGGGTGACTCAGTTGGAAACATTGCCGCGGATGCGTCGACTCAGACGGAGGAGAAGCGGAGGAGGAGGAGAGTTGTCAGAGAGAAGGAAGATGAAGATGAGAAAGAGAAGAATGAAATTGAAACGGAGGGAGAGAGGGCCCCACACGTTGAATGTAATCAAAATCAGAGTACGGAGCTGAGTAGGGAAGAGATCTCGCCTCCACCGTCGGATTCGAGTCCGGAAACACTGGGAACACTTATGAAGGTAGATGGACGGCTGGGATTACGATCTGAGGTTTCTGCGAAGGAGAATCCGACGGTTGAAAGCTGTCCTAGTGGAAGGATGAAAGCTTCATCAGTGCTCTTGCAGTTGTTATCGTGCGGTGCGGTTTCTTTCAAGGAGAGTGTGAGTGGGGCCAGCTCGGGTAAAGATCAAGGATTCTCATTACTCGGGCATTACAAGTCTAGATTACCCCGCGGAGCAGGGAATCATAACCATGAGGGTAAAGAAATAGGGACATTGATGGAAATTCCTGAATTGGGCAGGGTGAGATTGGAAGATAAAGAGTATTTTAGTGGAAGCTTGATTGAAACCAAAAAAGTGGAAGTTCCTATGGCATTTAAGAGGTCCTCTTCTTACAATGCTGATAGTGGTTCCCGGTTGCAAATCATGGAGCATGAGGAAGATTCGGTGCGGGCAAAGTGCATACCAAGGAAATCCAAGACACTAGCAACAAAGAAAGAAGAGGGTACTTCAAGTTCCATGGATAGAGTTAGCCGTAGCCAACATGGAAGTAAAAGATTTGAGGGACAACAATAA 1302 0.4708 MSVNSSSRGRIGARETSPERTKVWTEPKPKTTRKVSVVYYLSRNGQLQHPHFMEVPLSSPHGLYLKDVIVRLNLLRGKAMATMYSWSSKRSYKNGFVWHDLSENDFIYPTQGQDYILKGSEILDHVTTTAQTPFEEESDSPVVITRRRNQSWSSIDLNEYRVYKSESLGDSVGNIAADASTQTEEKRRRRRVVREKEDEDEKEKNEIETEGERAPHVECNQNQSTELSREEISPPPSDSSPETLGTLMKVDGRLGLRSEVSAKENPTVESCPSGRMKASSVLLQLLSCGAVSFKESVSGASSGKDQGFSLLGHYKSRLPRGAGNHNHEGKEIGTLMEIPELGRVRLEDKEYFSGSLIETKKVEVPMAFKRSSSYNADSGSRLQIMEHEEDSVRAKCIPRKSKTLATKKEEGTSSSMDRVSRSQHGSKRFEGQQ* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g5008 433 Coils Coil 190 210 - -
Psa7g5008 433 MobiDBLite consensus disorder prediction 13 27 - -
Psa7g5008 433 MobiDBLite consensus disorder prediction 174 243 - -
Psa7g5008 433 MobiDBLite consensus disorder prediction 390 433 - -
Psa7g5008 433 Pfam Protein SOSEKI, plant 35 131 IPR010369 -
Psa7g5008 433 Pfam Protein SOSEKI, plant 135 378 IPR010369 -
Psa7g5008 433 MobiDBLite consensus disorder prediction 1 27 - -
Psa7g5008 433 MobiDBLite consensus disorder prediction 181 215 - -
Psa7g5008 433 PIRSF UCP031043 3 422 IPR021182 -
Psa7g5008 433 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 13 401 IPR010369 -
Psa7g5008 433 MobiDBLite consensus disorder prediction 216 243 - -
Psa7g5008 433 PANTHER OS01G0839200 PROTEIN 13 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g5008 Psa-Chr7 440557353 440560741 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g5008 - - gmx:100803283 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g5008 7 440557353 440560741 Psa7g5008 7 440557353 440560741 ECH