Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4983 ATGGCTGCGAATTCTTCTAATGGAGATAACCAAAAAACATCTAAGCAACCTCCATTGCCATCTCCCCTGCGTTTCTCCAAATTCTTTCAGTCTAACATGAGAATCTTGGTTACTGGAGGAGCTGGATTCATTGGTTCTCACCTTGTCGATAGATTGATGCAAAATGAAAAGAATGAGGTCATTGTTGCTGATAACTACTTCACTGGATCGAAGGACAACCTCAAAAAATGGATTGGTCATCCAAGATTTGAGCTTATCCGTCATGATGTCACTGAGCCTTTGATGATTGAGGTCGATCAGATCTACCATCTTGCTTGTCCCGCATCTCCTATTTTCTACAAATATAATCCCGTGAAGACAATCAAGACAAACGTGATTGGCACTCTGAACATGCTTGGGCTTGCAAAACGAGTTGGAGCAAGGATTTTGCTTACATCAACTTCGGAGGTATATGGTGATCCTCTTGAGCATCCTCAACCTGAAACCTATTGGGGCAATGTTAACCCTATTGGAGTTCGTAGCTGCTATGATGAGGGGAAACGTGTCGCTGAGACTTTGATGTTTGATTATCATAGACAGCATGGAATAGAAATACGTGTTGCAAGAATCTTCAACACATATGGGCCGCGCATGAATATCGATGATGGACGTGTTGTCAGCAACTTCATTGCTCAAGCATTGCGTGATGAATCCTTGACAGTCCAATCTCCAGGAACGCAAACTCGCAGTTTTTGTTATGTCTCTGACCTGGTTGATGGCCTTATCCGTCTCATGGGAGGATCAGACACCGGTCCAATCAATCTTGGAAACCCGGGTGAATTCACTATGCTTGAACTTGCTGAGACAGTGAAGGAGCTTATTAATCCAAATGTGGAGATAAAGATAGTGGAGAACACTCCTGATGATCCAAGACAGAGAAAGCCAGACATAACCAAAGCACAGGAACTGCTCGGCTGGGAACCAAAGGTCAAGCTGCGCGACGGTCTTCCTCTTATGGAAGGAGATTTCCGTTTGAGGCTTGGAATTGAGAAGAACAACTAA 1041 0.439 MAANSSNGDNQKTSKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMQNEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLMIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRDESLTVQSPGTQTRSFCYVSDLVDGLIRLMGGSDTGPINLGNPGEFTMLELAETVKELINPNVEIKIVENTPDDPRQRKPDITKAQELLGWEPKVKLRDGLPLMEGDFRLRLGIEKNN* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4983 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 28 334 IPR036291 -
Psa7g4983 346 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 346 IPR044516 GO:0042732|GO:0048040|GO:0070403
Psa7g4983 346 MobiDBLite consensus disorder prediction 1 22 - -
Psa7g4983 346 CDD UGD_SDR_e 33 337 - -
Psa7g4983 346 Pfam GDP-mannose 4,6 dehydratase 36 330 IPR016040 -
Psa7g4983 346 Gene3D - 155 339 - -
Psa7g4983 346 Gene3D - 30 154 - -
Psa7g4983 346 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4983 Psa-Chr7 439260474 439265333 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4983 30 329 Miscellaneous Gene Families AT1G02000 23.881 4.19e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4983 K08678 - gmx:100782830 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4983 7 439260474 439265333 Psa7g4983 7 439260474 439265333 ECH