Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4979 ATGAAAAGACAAAAAAGCACAGAAAAAGTAGTACTAGTACATATCTGCTCCCTCCTCTTATACCTACTTTACCCTTCTTACAAATTTAAAAAAATCAAAACAACACAGCGTTTTCAACGACAGAGAAAGGGCATTCCAGTCATATCGAAAATAAAACTAGCCGTTCATCAATCATCATCAAACACCGTTCATTCTCCTCTTCATCTTTCTGCCTATAAGAACACAGCACATTCTAAGCTTACTCACAAATTCACAAATACAGTAACAGCTCCAATGGCTTCTTCTTCTTCGTCCTCCTTAACCAATTCGCTTCTCATCTCCACCTTCCTCTTCCTCACCATTTTCTCATCCTCCCACGCTCTTTTCTTCACCTTCGTTAACAACTGCCCCTACACTGTCTGGCCAGCTATTCTCCCCAACGAAGGCCACACCAACCTCGCCAGCGGCGGCTTCGAGCTCCGTACCTTCACCCACCGCTCCATCAACGTTCCAGACACCCACTGGGCCGGCCGTGCCTGGGCCAGAACCGGCTGCTCCACGTCCAACAACAAATTCACCTGCCTCACCGGCGACTGCGCCAACCGTCTCGAATGCAACGGAGCAGGCGGTTCACTACCCGCCAATCCACGTCCAACAACAAATTCACCTGCCTCACCGGCGACTGCGCCAACCGTCTCGAATGCAACGGAGCAGGCGGTTCACTACCCGCCACACTGGTACAGTTCGACGTACACCACGGCAACAACGACTTCTCCTCTTACAGCGTCAGCCTCGTCGACGCACCGTGTTCCTGCTGTTCATGGTCCTGTTGTGGCCTGTAAGAGTGGATGTGAAGCTTTTCACACAGATGAGTTCTGTTGTAGGAACCATTTTAACAACCCTCAAACTTGTAAACCTACCGTGTATACGAATTTCTTCAAGCACGCGTGTCCTGAGACTTTTACCTATGCGCATGATACACCTTCTTTGACTCATCAGTGTTCTTCCCCTCGTGAGCTTAAGGTTATCTTTTGCCACTAA 1020 0.4892 MKRQKSTEKVVLVHICSLLLYLLYPSYKFKKIKTTQRFQRQRKGIPVISKIKLAVHQSSSNTVHSPLHLSAYKNTAHSKLTHKFTNTVTAPMASSSSSSLTNSLLISTFLFLTIFSSSHALFFTFVNNCPYTVWPAILPNEGHTNLASGGFELRTFTHRSINVPDTHWAGRAWARTGCSTSNNKFTCLTGDCANRLECNGAGGSLPANPRPTTNSPASPATAPTVSNATEQAVHYPPHWYSSTYTTATTTSPLTASASSTHRVPAVHGPVVACKSGCEAFHTDEFCCRNHFNNPQTCKPTVYTNFFKHACPETFTYAHDTPSLTHQCSSPRELKVIFCH* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4979 339 PRINTS Pathogenesis-related protein signature 122 134 IPR001938 -
Psa7g4979 339 PRINTS Pathogenesis-related protein signature 171 182 IPR001938 -
Psa7g4979 339 PRINTS Pathogenesis-related protein signature 183 212 IPR001938 -
Psa7g4979 339 PRINTS Pathogenesis-related protein signature 329 338 IPR001938 -
Psa7g4979 339 SUPERFAMILY Osmotin, thaumatin-like protein 122 338 IPR037176 -
Psa7g4979 339 PANTHER OS03G0233200 PROTEIN 104 339 IPR001938 -
Psa7g4979 339 Pfam Thaumatin family 127 338 IPR001938 -
Psa7g4979 339 Gene3D Thaumatin 122 338 IPR037176 -
Psa7g4979 339 ProSiteProfiles Thaumatin family profile. 123 339 IPR001938 -
Psa7g4979 339 SMART tha2 123 339 IPR001938 -
Psa7g4979 339 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 104 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4979 Psa-Chr7 439017763 439018886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4979 104 338 Receptor kinase-like Gene Family AT5G38280 32.129 1.16e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4979 - - cam:101503313 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4979 7 439017763 439018886 Psa7g4979 7 439017763 439018886 ECH