Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4894 ATGTATCCCAAACGTTCTAGCCAGGATGATCCTGTTTCTGGGCCAGTACGCACAAGTGATAGGATTAAAACAAGGCCACCAGGTTATAACCGCGCACCATTCTTGTATTACAACTCAAATCTTAGGCGCCCCAGGAAAAACAAGAATAAGACGAGAACAGCAGCTTCACAGATTGCTAAGATGCTGCGTCCAGGTCCAGGGAATCGGAAAGCACACGATTCAAATGCTAATTCTGGCTCGGCCAACCTTCGGCGCTCAACTAGGGAGAGAAGGATTAATGTAAATCTTCGGGAGTTTGCAGACAGCTCTGGATCCGAGGATGCAGACTTAATGCGTCGTACATATCGACCATTAAGAAACCAGATTAGCAACAGTGTCAGCCGGGATGATGTAGTATCTTCTAAGCGCAAGCGTGCAGTGGATACTAAACCAGCACCTCGACGGGAAGGTCTAAGGCCTCGTCGATCGAAGGCTGCTGGTAGTGAAAGATTAATTTCAGAATCAGATGATGGTCAAGACCTTTCAGAGGAGAAGGTTGAACAAGATGAAACAGAAAATGGAGATGATGTTGAGGAAAATGATGCAGAAGATGGTCATGAGAGGGAGGGAGATGCTGAGGGTGAAGATGAAGGCGAGGATGAAGGTGACGAGGATGGCGATGATGAAGACGGTGAAGAGGAGCAGGATGGAAGAAGGCGTTACGATCTTCGAAATCGTGCAGATGTCCGCAGATTCTCTATGGAGGAAGGGAAGACGCGGCCAAGGTCTCCTCGAAGAGTGTTACATCAAGGTATGGGAACCAAGGTCAGCAGGGATGTAAGGAAGGGTGGATCACGTGTTCACAAGCGCCACCGCTTAACTAGGCCTGAAGATTCGGATGACTCCCTTCTTGTGGATGAGTTGGACCAAGGCCCTGCTATTCCGTGGGGGCGAGGTGGTGGCAGATCTGGCCCGCCTTTTCTTTTTGGGGGCCTAGACACGCATGGAACAACAGCTTGGGGATTAAACCTTGCTGCCTCGGGTTGGGGTCATCAGGGCGATGCTTTTGCGACTCTAACTTCAGGGATTCAAACTGCTGGTCCAAGCTCTAAAGGAGGGGCAGATATCCAACCCTTGCAGATTGATGATAGTGTGAGTTTTGATGATATAGGTGGGCTCTCTGAATACATTGATGCTCTAAAGGAAATGGTTTTCTTTCCATTGTTGTATCCAGATTTTTTTGCAAGTTACCATATAACTCCACCTAGGGGGGTGTTGTTATGTGGCCCCCCTGGCACGGGAAAAACATTAATTGCAAGAGCTTTGGCTTGCTCTGCTTCAAAAGCTGGTCAGAAGGTTAGCTTTTACATGCGCAAAGGAGCAGATGTGCTAAGCAAGTGGGTAGGTGAGGCTGAAAGACAACTGAAACTACTTTTTGAGGAAGCACAAAGGAATCAACCTTCTATCATCTTCTTTGACGAAATTGATGGACTTGCACCCGTGAGATCTAGCAAGCAAGAACAAATTCACAATTCCATTGTGTCCACATTGCTTGCTTTGATGGATGGTCTTGATTCTCGTGGACAAGTTGTTTTAATAGGTGCTACCAACAGGATAGATGCTATTGATGGAGCCTTGCGACGTCCTGGCAGATTTGATTGTGAATTTAACTTTCCCTTACCTGGTTGTGAGGCACGTGCTGAAATATTAAATATTCATACTCGTAAGTGGAAACATCCTCCTCCAGAGGAACTGAAAAAGGAACTTGCAGCTAGTTGTGTAGGTTACTGTGGTGCTGACCTAAAGGCTCTCTGTACTGAAGCTGCCATTCGTGCTTTCCGTGAAAAATACCCACAGGTTTATACAAGTGATGACAAATTTCTCATCGATGTTGATTCTATCAGAGTAGAAAAGTGTCATTTTATTGAAGCAATGTCTACAATTACTCCTGCTGCTCATAGAGGAGCTACTGTGCACTCTAGGCCATTGTCACTTGTAGTTCAACCATGTCTTCAGAGATATCTGGAGAAAGCCATGAGTACTATATCTGATATTTTCCCTCCAGTATCTGTTGCATCAGAATTAACCAAACTTTCCATGCTTTCGTACGGGTCTGCAATTCCACTTGTATATCGACCTAGGCTTCTACTTTGTGGTGGTGAAGGCACAGGGCTGGATCATCTTGGGCCTGCGGTTTTACATGAACTGGAAAAATTTCCTGTGCATTCATTAGGACTTCCATCTCTTCTGTCAGATCCCAGTGCGAAGACACCGGAGGAGGCATTGGTACATATATTTGGTGAAGCTAGAAGAACGACACCATCAATTCTCTACTTACCACAATTTGATGTTTGGTGGGAAACTGCTCATGAACAGCTCAGAGCCGTTCTCCTGACTATGCTAGAAGAATTGCCATCTGACTTACCTATCTTACTTCTTGGTACATCCTCAGTTGCACTTGCTGATGTTGATGAAGTGCCTACTTCAGTTTTCCCTCATCGCTCAGTTTATCAAGTGAACATGCCATCTACCGAAGATAGGACCTTGTTTTTTAATCGTTTAATAGAAGCTGCTATGTCGATATTGTTGGAGCGAATCAGCAACAAATCCCAGGATACAGGAAGCCGTTCTGAACTTCCTAGGGCGCCAAAATTGGCGAGTGGCCCAAAGGCATCTGAGCTAAAAGCAAAGGTTGAAGCTGAGCAGCATGCACTTCGAAGATTGCGAATGTGCCTTAGAGATGTTTGCAACCGGATATTGTATGACAAACGGTTTAATGCCTTCCATTTTCCAGTCTCAGATGAAGATGCGCCTAATTATCGCTCAATTATACAGAACCCAATGGACATTGCTACTATCTTGCAGCATGTAGATAACAGCAACTATATTACATGTGCAGCATTCCTGCAGGACATTGATCTTATTGTTTCCAATGCCAAGGCTTACAATGGAGATGACTACAATGGCACTAGGATTGTCAGTAGAGCTTGTGAGCTCCGTGATACGGTGCATGGGATGCTCTCTCAAATGGATCCAGCACTGGTTGCATTTTGTGACAAGGTTGCTAGCCAAGGTGGCCCAGTTCATTTGCCTGAGGAATTAGGGGATTCTACGTTCCCCGCTGTTCCTGTTGTACAGCTGGGTACCACTACTAGAACTAGTGCTCGACTTCGTCATGTCCAACCAGAGGTTAACATGGATCAGGGTTACGAAGTATTGAAGCGGACTAAGAAGATCGGTGATGCTGTACATACAGCAGAAAGCAAATCACAAGATTCAATACCAGTAAAGTCCTCTCAGGAGCAGCATCAGGCACATGACGAGGATTCTGAAAGAATAGAACCTGAAGCAATTGATGGAGATTTGCTTGGATCTTGTACAAATAACCTTGCTGATGGTAGCAGCCTTCATGATATCACAATGCAAGATGGTGAATTTTCAAGACAGGTCGAGTCTGTTAAGCAGCATTTCGTTAAGCGCAGTGAAAAATACAGCATCCCACAACTTGAAAGGCTTTACACAAGAATCATGAAGGGTGTGTTTGAAACCAAAGATAAAGGAATGAATCATGATGACCTCAAGAATTCGGTTTTGGGGTTTTTGTTGAAATTTGTAGAGGATGATGCGAATTTCTGA 3615 0.4509 MYPKRSSQDDPVSGPVRTSDRIKTRPPGYNRAPFLYYNSNLRRPRKNKNKTRTAASQIAKMLRPGPGNRKAHDSNANSGSANLRRSTRERRINVNLREFADSSGSEDADLMRRTYRPLRNQISNSVSRDDVVSSKRKRAVDTKPAPRREGLRPRRSKAAGSERLISESDDGQDLSEEKVEQDETENGDDVEENDAEDGHEREGDAEGEDEGEDEGDEDGDDEDGEEEQDGRRRYDLRNRADVRRFSMEEGKTRPRSPRRVLHQGMGTKVSRDVRKGGSRVHKRHRLTRPEDSDDSLLVDELDQGPAIPWGRGGGRSGPPFLFGGLDTHGTTAWGLNLAASGWGHQGDAFATLTSGIQTAGPSSKGGADIQPLQIDDSVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACSASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDCEFNFPLPGCEARAEILNIHTRKWKHPPPEELKKELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSIRVEKCHFIEAMSTITPAAHRGATVHSRPLSLVVQPCLQRYLEKAMSTISDIFPPVSVASELTKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFDVWWETAHEQLRAVLLTMLEELPSDLPILLLGTSSVALADVDEVPTSVFPHRSVYQVNMPSTEDRTLFFNRLIEAAMSILLERISNKSQDTGSRSELPRAPKLASGPKASELKAKVEAEQHALRRLRMCLRDVCNRILYDKRFNAFHFPVSDEDAPNYRSIIQNPMDIATILQHVDNSNYITCAAFLQDIDLIVSNAKAYNGDDYNGTRIVSRACELRDTVHGMLSQMDPALVAFCDKVASQGGPVHLPEELGDSTFPAVPVVQLGTTTRTSARLRHVQPEVNMDQGYEVLKRTKKIGDAVHTAESKSQDSIPVKSSQEQHQAHDEDSERIEPEAIDGDLLGSCTNNLADGSSLHDITMQDGEFSRQVESVKQHFVKRSEKYSIPQLERLYTRIMKGVFETKDKGMNHDDLKNSVLGFLLKFVEDDANF* 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4894 1204 PANTHER AAA DOMAIN-CONTAINING 1 1199 IPR045199 -
Psa7g4894 1204 MobiDBLite consensus disorder prediction 268 293 - -
Psa7g4894 1204 PRINTS Bromodomain signature 930 946 IPR001487 GO:0005515
Psa7g4894 1204 PRINTS Bromodomain signature 946 964 IPR001487 GO:0005515
Psa7g4894 1204 PRINTS Bromodomain signature 964 983 IPR001487 GO:0005515
Psa7g4894 1204 PANTHER BNAC08G44480D PROTEIN 1 1199 - -
Psa7g4894 1204 Gene3D - 376 646 IPR027417 -
Psa7g4894 1204 MobiDBLite consensus disorder prediction 173 225 - -
Psa7g4894 1204 MobiDBLite consensus disorder prediction 119 237 - -
Psa7g4894 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 377 640 IPR027417 -
Psa7g4894 1204 MobiDBLite consensus disorder prediction 1075 1105 - -
Psa7g4894 1204 SMART bromo_6 898 1005 IPR001487 GO:0005515
Psa7g4894 1204 Pfam Bromodomain 912 979 IPR001487 GO:0005515
Psa7g4894 1204 Gene3D - 890 1018 IPR036427 GO:0005515
Psa7g4894 1204 MobiDBLite consensus disorder prediction 1 89 - -
Psa7g4894 1204 MobiDBLite consensus disorder prediction 130 172 - -
Psa7g4894 1204 MobiDBLite consensus disorder prediction 1079 1093 - -
Psa7g4894 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 702 917 IPR027417 -
Psa7g4894 1204 CDD AAA 414 553 - -
Psa7g4894 1204 Gene3D - 554 639 - -
Psa7g4894 1204 SUPERFAMILY Bromodomain 894 1008 IPR036427 GO:0005515
Psa7g4894 1204 ProSiteProfiles Bromodomain profile. 921 983 IPR001487 GO:0005515
Psa7g4894 1204 Pfam AAA+ lid domain 580 617 IPR041569 -
Psa7g4894 1204 Pfam ATPase family associated with various cellular activities (AAA) 418 552 IPR003959 GO:0005524|GO:0016887
Psa7g4894 1204 SMART AAA_5 414 555 IPR003593 -
Psa7g4894 1204 ProSitePatterns AAA-protein family signature. 523 541 IPR003960 GO:0005524|GO:0016887
Psa7g4894 1204 Gene3D - 676 848 IPR027417 -
Psa7g4894 1204 CDD Bromo_AAA 898 1008 - -
Psa7g4894 1204 MobiDBLite consensus disorder prediction 865 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4894 Psa-Chr7 428664390 428673401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g4894 364 618 Calmodulin-binding Proteins AT3G56690 35.907 6.29e-40 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4894 K22531 - gmx:100787765 1952.56