Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g4872 ATGCTCAAGAAGTTTTTATCAAACTATCCCTCTGAAGATGTTCTTGAATATCAAGTCGTCTCTTTGAAGTCAACACTGCTATCCAACAACATTGAAGTGGAGACTTTTGTTTCAAGGTTCTCTGGTGGTTTATCCTCTCAGCTCTCTAGTGATTATAATCAACTTAAAGATATCTCAAGTCTCATCATATTAGAAGATTTAAAATTTTTGTGTAATACTAAAGTCAAAGATAATAATGTCAAGCAGGGTCGTCTCAACCAATGCTCCGTCGACGACGACGACGAATTGGTTGAACTGCCAGAGGAATCAGAATTAGACCATCAGGTTGATGATTCCGACGACGAAGATGTTGATGTCATCGCGCTCGAGCAAGAAGCAAAGGAAGTTGTACTGGAGTATTCAACCTCTCTATCTCGCATTTTGACTATAGAAGATGAGAGTAGTGATGCCAAGGAAACGGATAAAAAATCCAAGAGGAATAAACCGGAGAGAAAAATTATCCCTGACAATCTTCTCCCAAGGATTGCTATTGTTGGAAGACCGAATGTTGGCAAGTCAGCGTTATTTAACCGTCTCGTTGGGGGCAATAAGGCAATTGTGGTGGATGAACCCGGGGTTACGAGGGATCGTTTATATGGCCGGTCATATTGGGGAGACCATGAATTCATGGTGGTGGACACTGGGGGTGTTATAACTGTTTCAAAATCACAATCCACTGTTATGGAGGACCTGGATATTACGACGACAATTGGTATGGATGGTATTCCCCTTGCCTCTAGAGAAGCAGCTGTTGCCAGGATGCCATCAATGATTGAGAAACAAGCAATTGCAGCTGTGGAAGAATCATCTGTTATTGTTTTCCTGGTTGATGGTCAGGCAGGTCTAATAGCAGCTGACGTGGAGATTGCTGATTGGCTACGGAAAAACTACTCAAATAAACGTATCATTCTAGCAGTTAACAAGTGTGAATCTCCACGGAAAAGAATTATGCAGGCATCTGAGTTTTGGGCCCTCGGGTTTGAACCAATTCCAGTATCAGCTATATCAGGGACCGGAACTGGAGAGCTTCTTGACCTTGTTTGTTCAGGGATACAGAAAGTTGAGGAGCCAGAGAATCTTGTTGAAGAAGAAGATTATGTTCCAGCAATTTCTATTGTTGGTAGACCAAATGTTGGCAAAAGTAGCATTTTAAATGCACTGGTTGGTGAGGACAGAACAATAGTTAGCCCCATCAGTGGCACTACACGTGATGCTATTGATACTGAATTTATTGGAGCAGATGGCCAGAAGTTCCGTCTTATCGATACTGCTGGAATCAGGAAAAGGACAACTGTAGCCTCAGCAGGAAGTACAACAGAGGCTTTGTCAGTGAATCGAGCATTTCGTGCTATTCGTCGTTCTGATGTTGTTGCTCTTGTCATTGAAGCCTTGGCTTGTATCACGGAGCAGGACTACAAGATAGCTGAAAGGATAGAAAAAGAAGGGAAAGGTTGTGTGATTGTTGTAAACAAGTGGGATACAATACCAGATAAAAACCATCAGACTGCATTACACTATGAACAAGATGTCAGAGAGAAGCTTCGCTTACTTAACTGGGCTCCAGTTGTTTATTCTACTGCTCTAGCTGGCCATAACGTTGACAAGATCATTGTTGCTGCTAGTGAAGTTGAAAAAGAGAGATCAAGAAGACTGGGCACTTCTATATTGAATCAAGTAGTACAGGAAGCGGTAACTTTTAAGTCTCCTCCCAGGACACGAGGTGGAAAAAGAGGGCGTGTATACTATTGCACTCAGGCTGCTATAAGGCCGCCTACATTTGTGTTCTTTGTCAATGATGCAAAACTTTTTTCTGAAACTTACCGCCGTTTTATGGAGAAGCAGCTGCGTTCAAATGCGGGATTTCCTGGTACACCCATTCGGCTTTTGTGGCGCAGCAGAAAAAAAATGGAAAAAGATGAAGGAAAAAAGGCGACGCGGTCCAAACAAAATCCTGCTTCATACCGTCGAAAATTGATACCAATTACACAGTAG 2031 0.4244 MLKKFLSNYPSEDVLEYQVVSLKSTLLSNNIEVETFVSRFSGGLSSQLSSDYNQLKDISSLIILEDLKFLCNTKVKDNNVKQGRLNQCSVDDDDELVELPEESELDHQVDDSDDEDVDVIALEQEAKEVVLEYSTSLSRILTIEDESSDAKETDKKSKRNKPERKIIPDNLLPRIAIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSYWGDHEFMVVDTGGVITVSKSQSTVMEDLDITTTIGMDGIPLASREAAVARMPSMIEKQAIAAVEESSVIVFLVDGQAGLIAADVEIADWLRKNYSNKRIILAVNKCESPRKRIMQASEFWALGFEPIPVSAISGTGTGELLDLVCSGIQKVEEPENLVEEEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFIGADGQKFRLIDTAGIRKRTTVASAGSTTEALSVNRAFRAIRRSDVVALVIEALACITEQDYKIAERIEKEGKGCVIVVNKWDTIPDKNHQTALHYEQDVREKLRLLNWAPVVYSTALAGHNVDKIIVAASEVEKERSRRLGTSILNQVVQEAVTFKSPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFSETYRRFMEKQLRSNAGFPGTPIRLLWRSRKKMEKDEGKKATRSKQNPASYRRKLIPITQ* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g4872 676 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 173 368 IPR031166 GO:0005525
Psa7g4872 676 Gene3D - 170 377 IPR027417 -
Psa7g4872 676 Gene3D - 378 561 IPR027417 -
Psa7g4872 676 MobiDBLite consensus disorder prediction 645 659 - -
Psa7g4872 676 Hamap GTPase Der [der]. 172 647 IPR016484 GO:0005525
Psa7g4872 676 TIGRFAM GTPase_EngA: ribosome-associated GTPase EngA 266 643 IPR016484 GO:0005525
Psa7g4872 676 Pfam 50S ribosome-binding GTPase 174 321 IPR006073 GO:0005525
Psa7g4872 676 Pfam 50S ribosome-binding GTPase 383 504 IPR006073 GO:0005525
Psa7g4872 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 341 651 IPR027417 -
Psa7g4872 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 364 IPR027417 -
Psa7g4872 676 MobiDBLite consensus disorder prediction 645 676 - -
Psa7g4872 676 PRINTS GTP1/OBG GTP-binding protein family signature 175 195 IPR006073 GO:0005525
Psa7g4872 676 PRINTS GTP1/OBG GTP-binding protein family signature 272 290 IPR006073 GO:0005525
Psa7g4872 676 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 381 561 IPR031166 GO:0005525
Psa7g4872 676 CDD EngA1 176 364 - -
Psa7g4872 676 PANTHER GTPASE DER 152 655 - -
Psa7g4872 676 Gene3D - 563 647 IPR015946 -
Psa7g4872 676 Pfam KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 563 644 IPR032859 -
Psa7g4872 676 TIGRFAM small_GTP: small GTP-binding protein domain 381 550 IPR005225 GO:0005525
Psa7g4872 676 CDD EngA2 383 556 - -
Psa7g4872 676 PANTHER GTP-BINDING PROTEIN 152 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g4872 Psa-Chr7 424427769 424452041 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g4872 - - gmx:100777588 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g4872 7 424427769 424452041 Psa7g4872 7 424427769 424452041 ECH